Burkholderia pseudomallei HBPUB10134a: DR55_1760
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Entry
DR55_1760 CDS
T03422
Name
(GenBank) beta-eliminating lyase family protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpsh
Burkholderia pseudomallei HBPUB10134a
Pathway
bpsh00260
Glycine, serine and threonine metabolism
bpsh00460
Cyanoamino acid metabolism
bpsh00630
Glyoxylate and dicarboxylate metabolism
bpsh00670
One carbon pool by folate
bpsh00680
Methane metabolism
bpsh01100
Metabolic pathways
bpsh01110
Biosynthesis of secondary metabolites
bpsh01120
Microbial metabolism in diverse environments
bpsh01200
Carbon metabolism
bpsh01230
Biosynthesis of amino acids
bpsh01240
Biosynthesis of cofactors
bpsh04981
Folate transport and metabolism
Module
bpsh_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bpsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DR55_1760
09102 Energy metabolism
00680 Methane metabolism
DR55_1760
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DR55_1760
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DR55_1760
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DR55_1760
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DR55_1760
Enzymes [BR:
bpsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DR55_1760
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AIP52442
LinkDB
All DBs
Position
1:2011825..2013072
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AA seq
415 aa
AA seq
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MFDRAQSTIANVDPEIWQAIQQENVRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDIVEQLAIDRVKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEAEDIDYEAAEQLAHEHKPKLIVAGASAFAL
KIDFERLAKIAKAVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKQINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKEYQQKVVENARVLAQTL
VKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGNAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGPQEAELVGNLIADVLEHPEDAATIERVRAQVAELTKRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccattgcgaacgtcgatcccgagatctggcaagcgatt
cagcaggaaaacgtccgtcaggaagagcacatcgagctgatcgcgtcggagaattacacg
agcccggccgtgatggcggcgcaaggctcgcaactgacgaacaagtacgcggaaggctat
ccgggcaagcgctattacggcggctgcgaatacgtggacatcgtcgagcagctcgcgatc
gatcgcgtgaaggcgctgttcggcgccgaagcggcgaacgtgcagccgaactcgggctcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctcacgcacggctcgccggtgaacatgtcgggcaagtgg
ttcaacgtcgtgagctacgggctgaacgaggctgaagacatcgattacgaagcggccgag
cagctcgcgcacgagcacaagccgaagctgatcgtcgcgggcgcgtcggcgttcgcgctg
aagatcgatttcgagcgcctcgcgaagatcgccaaggcagtgggcgcgtacctgatggtc
gacatggcgcactacgcgggcctgatcgcggcgggtgtctatccgaacccggtgccgcac
gcggatttcgtcacgacgacgacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagtacgagaagcagatcaactcggcgatcttcccgggcatccagggc
ggaccgctgatgcacgtgatcgccgcgaaggccgtcgcgttcaaggaagcgctgtcgccg
gaattcaaggaataccagcagaaggtggtcgagaacgcccgcgtgctggcgcaaacgctc
gtcaagcgcggcctgcgcatcgtgtcgggccgcaccgagagccatgtgatgctggtcgac
ctgcgcgcgaagaacatcacgggcaaggcggcggaagcggcgctcggcaatgcgcacatc
acggtcaacaagaacgcgatcccgaacgatccggagaagcccttcgtgacgagcggcgtg
cgcctgggctcgccggcgatgacgacgcgcggcttcggcccgcaggaagcggagctcgtc
ggcaacctgatcgccgacgtgctcgagcatcccgaagacgcggcgacgatcgagcgcgtg
cgtgcgcaggtcgccgagctgacgaagcgtttcccggtctatcgctga
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