Burkholderia pseudomallei HBPUB10134a: DR55_3252
Help
Entry
DR55_3252 CDS
T03422
Name
(GenBank) lysM domain protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
bpsh
Burkholderia pseudomallei HBPUB10134a
Brite
KEGG Orthology (KO) [BR:
bpsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bpsh01011
]
DR55_3252
Enzymes [BR:
bpsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DR55_3252
Peptidoglycan biosynthesis and degradation proteins [BR:
bpsh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DR55_3252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
DUF6692
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
AIP50218
LinkDB
All DBs
Position
1:complement(3779500..3781092)
Genome browser
AA seq
530 aa
AA seq
DB search
MRFLLSALLVLTLAACAGTGPTAQNPAASDPQAASDYLRKSASAKETVDVDKQSVGDLTT
ADSDLWARIRRGFQMPDLQSDLVDMQASWYAQRPDYVQRMTERSQKYLYHIVEELESRHM
PTELALLPFIESAYNPQALSVAKAAGMWQFMPATGRTFNLKRNMWQDERRDVLASTSAAL
DYLSRLHDMFGDWYLALAAYNWGEGNLQRAIARNQAAGLPTDYQSLRMPNETRNYVPKLQ
AVKNIVTNPQQYGLTLPEIPNHPYFVTVTTSRDIDVTVAAKLANLPLDEFKSLNPSFSKP
VILGATQPQILLPFDNAAAFEKGLKSYDGQLSSWTAYTVTERARPAAIAEKIGVDADTLM
QVNKIPAGMRLKPGSTIVVPRTDDDDEDISADVAENGVLAMEPDVPDTRKMLIRVRRKQS
MEALASRYGVSVAQLRGWNRTRRAVVMPGQTMVLHVPVGRAVPAEPGPERIATSVGGGRI
ERASLHTGGKASSRGRKAGPAAKASAKAATKSGAKAAPAKTAGRKTTKKK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcgattcctcctcagtgcgctattggtcctgacgctcgccgcgtgcgcgggcaccggg
ccgaccgcccaaaatcccgcggcctccgacccgcaagccgcttcggactacttgcgcaag
tccgcttccgcgaaagaaaccgtcgacgtcgacaagcagtcggtcggagacctcaccacc
gccgacagcgatctctgggcgcgcatccgccgcggcttccagatgcccgacctgcagagc
gatctcgtcgacatgcaggcgtcgtggtacgcgcagcgccccgactatgtgcagcggatg
accgaacgctcgcagaagtacctgtaccacatcgtcgaggagctcgaatcgcgccacatg
ccgaccgaactcgcgctgctgccgttcatcgaatcggcgtacaacccgcaggcgctgtcc
gtcgcgaaggcggcggggatgtggcagttcatgccggctacggggcgcacgttcaacctg
aagcgcaacatgtggcaggacgagcggcgcgacgtgctcgcgtcgacgagcgcggcgctc
gattacctgtcgcgcctgcatgacatgttcggcgactggtatctcgcgctcgccgcgtac
aactggggcgagggcaatctgcagcgcgcgatcgcgcgcaaccaggcggcggggctgccg
accgattaccagagcctgcggatgccgaacgagacgcgcaactacgtgccgaagctgcag
gcggtcaagaacatcgtgacgaacccgcagcagtacggcctcacgctgccggagattccg
aaccacccgtatttcgtgacggtcacgacctcgcgcgacatcgacgtgacggtcgccgcg
aagctcgcgaacctgccgctcgacgaattcaagtcgctcaacccgtcgttctcgaagccc
gtgattctcggtgcgacgcagccgcagatcctgctgccgttcgataacgcggcggcgttc
gagaaggggctgaagtcgtacgacggccagctttcgtcatggaccgcgtatacggtcacc
gagcgcgcgcggccggccgcgatcgcggagaagatcggcgtcgacgcggatacgctgatg
caggtgaacaagattccggccggcatgcggctgaagcccggctcgacgatcgtcgtgccg
cgcaccgacgacgatgacgaggacatcagcgccgacgtcgccgagaacggcgtgctcgcg
atggagccggacgtgcccgatacgcgcaagatgctgattcgcgtgcgccgcaagcagtcg
atggaagcgctcgcgagccgctacggcgtgtcggtcgcgcaactgcgcggatggaaccgc
acgcgccgcgcggtcgtgatgccgggccagacgatggtgctgcacgtgcccgtcggtcgt
gcggtgccggccgagccggggcccgagcggatcgcgacgtcggtaggcggcgggcgcatc
gagcgcgcgagcctgcacacgggcggcaaggcgtcgagccgcggccgcaaggcggggccc
gccgcgaaggcgtcggcgaaggccgcgacgaagagcggtgcgaaagccgcgcccgcgaaa
accgcgggccgcaagacgacgaagaagaagtaa
DBGET
integrated database retrieval system