KEGG   Burkholderia pseudomallei HBPUB10134a: DR55_3992
Entry
DR55_3992         CDS       T03422                                 
Name
(GenBank) DEAD/H associated family protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bpsh  Burkholderia pseudomallei HBPUB10134a
Brite
KEGG Orthology (KO) [BR:bpsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpsh03400]
    DR55_3992
Enzymes [BR:bpsh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DR55_3992
    5.6.2.6  RNA 3'-5' helicase
     DR55_3992
DNA repair and recombination proteins [BR:bpsh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    DR55_3992
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C Lhr_WH ResIII DprA_WH MarR_2 HTH_IclR
Other DBs
NCBI-ProteinID: AIP54385
LinkDB
Position
2:complement(690379..695163)
AA seq 1594 aa
MHATPARPAAGALDAFHPVVAAWFSDTFAAPTGAQALAWPHIKAGRSTLVAAPTGSGKTL
TAFLSALDDLVRDALAHDGALPDETLVVYVSPLKALSNDIHVNLEAPLAGIAAEIARRGL
PVPQIRTAVRTGDTTQAERVAHRKHAPHILVTTPESLYVLLSSESGRRMLASTRTVIVDE
IHALANAKRGSHLALSLERLDALVGRKLPRIGLSATQKPVEAVTRFLVGGRDDAPLDCAI
VDTGHTRTRDLALELPPVPLGPVMANDVWERLYDRIAKLAAAHRTTLVFVNTRRMAERAA
RHLADRLGADAIAAHHGSLAKEHRFDAEQRLKHGKLKLLVATASLELGIDIGDVELVCQL
GSPRGIAPFLQRVGRSGHHIGGVPKGRLFPLSRDELVECAALLDCVRRGELDVLRIPRAP
LDVLAQQLVAEVACREWDEHALYRCVTQAAPYATLARETFDEVLKMLAEGFTSRRGARAA
YLHRDVVAHTVRGRRGARLAAVTSGGTIPDNADYAVLLEPQGVNIGTVNEDFAVESLAGD
VFQLGNQSYRIIRIETGRVRVEDAHGQAPNIPFWLGEAPARSDELSAGVARLRARLDALL
ARGDAAGAGAALPVNAASAPAPEREAAAAGQGARARAAAPHGTPALARRALPAALPAAPP
AVCARAAPSAAAPSTAIPSAAAPTVAAMPVPPEAELRAKPRRLAPALAWLTGELGLDAEA
ARQIADYLARARAALGALPTQDTLVMERFFDESGGMQLVIHSPYGSRINRAWGLALRKRF
CRSFNFELQAAATDDALILSLSHAHSFALDEVWRYLRASSAEHVLIQALLDAPLFAARWR
WNATTSLALPRFAGGRKVAPQLQRMKSEDLLATVFPDQVACAENIVGEREVPKHPLVDQT
LDDCLHDAMDTEGWLALLRRIEAGDVALVARDLPAPSPLAAEILNAKPYAFLDDAPLEER
RTQAVLARRWSDPESADDLGALDAGAIEAVRDEAWPLVREPDEMHDALVGLACIADDEIA
SHDGWRACVAQLAAGGRAARLALAGGRGLWIAAERVACMRALYGADVALDPPLAPPPGFD
APWEPEAALVDVIRARLTGFGPVTAAALAAPLALPAASVAIALAALEREGYVMRGRFTPG
ARDDEWCERHLLARIHRYTVKRLRREIEPVELADFMRFLFHWQRVAPDTRGLGGDALAAV
VHQLEGFEAAASAWEDEILPARLADYVAGGLDEPCRAGKLTWTRLGAPAKAASAPVKTTP
VVLLPRRELAIWQALRDPAAQPALSARAERVRATLAAYGAMFFDELAAHARLLPVELERA
LGELVAAGLVNADSFAGLRALLRPAAQRPSRARRGGALIGGMDDAGRWALVQRLPLAPLD
FVEGGSEDEAANDDDAPSGDGTPGAGPEAARRGGVREGGAEADARIARAMRAAPPQAGRH
AIAPAALEHVARTLLRRYGVVFWRLLACEAEWMPSWRELLPVYRRLEARGEIRGGRFVAG
LAGEQFALPDAIPILRELRRRPAEGLMLCVSGADPLNLTGTLLPGERVPALAGNRILFRD
GVPIASLVGGQFAFARELDALAQDRARARLARHR
NT seq 4785 nt   +upstreamnt  +downstreamnt
atgcacgccactcccgcccgccctgccgccggcgcgctcgacgcgttccaccccgtcgtc
gccgcctggttctccgacacgttcgccgcgcccaccggcgcgcaagcgctcgcgtggccg
cacatcaaggccggccgctcgacgctcgtcgccgcgccgacgggctccggcaagacgctc
accgcattcctgtccgcgctcgacgatctcgtgcgcgacgcgctcgcgcatgatggcgcg
ctgcccgacgagacgctcgtcgtctacgtgtcgccgctgaaagcgctgtcgaacgacatt
cacgtgaacctcgaagcgccgctcgccggcatcgccgccgaaatcgcgcggcgcgggctg
ccggtgccgcaaatccgcaccgccgtgcgcaccggcgacacgacccaggccgagcgcgtc
gcgcatcgcaagcacgcgccgcacattctcgtcacgaccccggaatcgctgtacgtgctg
ctgtcgtccgaatcgggccggcgcatgctcgcgagcacgcgcaccgtgatcgtcgacgaa
atccacgcgctcgcgaacgccaagcgcggcagccatctcgcgctgtcgctcgagcggctc
gacgcgctcgtcggccgcaagctgccgcgcatcgggctgtccgcgacgcaaaagccggtc
gaggcggtcacgcgctttctcgtcggcggccgcgacgacgcgccgctcgattgcgcgatc
gtcgacaccggccacacgcgcacgcgcgatctcgcgctggaattgccgcccgtgccgctc
gggcccgtgatggcgaacgacgtgtgggagcgcctctacgatcgcatcgcgaagctggcc
gccgcgcaccgcacgacgctcgtgttcgtcaacacgcgccggatggccgagcgcgcggcc
cgccatctggcggacaggctcggcgcggacgcgatcgccgcgcaccacggcagcctcgcg
aaggaacatcgcttcgacgccgagcagcgcctgaagcacggcaaactcaagctgctcgtc
gccacggcctcgctcgagctcggcatcgacatcggcgacgtcgagctcgtctgccagctc
ggctcgccgcgcggcatcgcgccgttcctgcagcgcgtcgggcgctccgggcaccatatc
ggcggcgtgccgaaggggcggctctttccgctgtcgcgcgacgaactcgtcgaatgcgcg
gcgctcctcgattgcgtgcggcgcggcgaactcgacgtgctgcgcattccgcgcgcgccg
ctcgacgtgctcgcgcagcagctcgtcgccgaagtcgcctgccgcgaatgggacgagcac
gcgctctatcgctgcgtgacgcaggccgcgccctacgcgacgctcgcgcgcgagacgttc
gacgaggtgctgaagatgctcgccgagggcttcacgagccggcgcggcgcgcgcgccgcg
tacctgcaccgcgacgtcgtcgcgcacacggtgcgcgggcggcgcggcgcccggctcgcg
gccgtcacctcgggcggcacgattcccgataacgccgactacgcggtgctgctcgagccg
cagggcgtgaacatcggcaccgtcaacgaggatttcgcggtcgaaagcctcgcgggcgac
gtgttccagctcggcaaccagtcgtaccggatcatccggatcgagacggggcgcgtgcgc
gtcgaggatgcgcacgggcaggcgccgaacatcccgttctggctcggcgaggcgcccgcg
cgcagcgacgagctgtcggcgggcgtcgcgcggctgcgcgcgcggctcgacgcgctgctc
gcgcgcggcgatgcggccggcgcgggtgcggccttgccggtgaacgccgcatccgcgccg
gcgcccgagcgcgaagcggccgcggccggccaaggcgcgcgtgcgcgcgccgccgcgccg
cacggcacgcccgccctcgcgcgccgcgctttgcccgctgcgctgcccgccgcaccgccc
gccgtctgcgcgcgcgccgccccatccgccgccgccccgtctaccgccatcccgtccgcc
gccgcgccgaccgtcgccgcgatgccggtcccccccgaggcggaactccgcgccaagccg
cgccgcctcgcgcccgcgctcgcgtggctcacgggcgagctcggcctcgatgccgaagcc
gcgcggcagatcgccgattacctcgcgcgcgcccgcgcggcgctcggcgcgctgccgacg
caggacacgctcgtgatggagcgcttcttcgacgaatcgggcggcatgcagctcgtgatc
cattcgccgtatggctcccggatcaaccgcgcgtggggcctcgcgctgcgcaagcgcttc
tgccgcagcttcaacttcgagctgcaggcggccgcgaccgacgacgcgctgatcctgtcg
ctgtcgcacgcgcacagcttcgcgctcgacgaggtgtggcgctacctgcgcgcgtcgagc
gccgagcacgtgctgatccaggcgctgctcgacgcgccgctgttcgccgcgcgctggcgc
tggaacgcgacgacgtcgctcgcgttgccgcgcttcgccggcggccgcaaggtcgcgccg
caactgcagcggatgaagagcgaggatctgctcgcgacggtgttccccgatcaggtcgcg
tgcgcggagaacatcgtcggcgagcgcgaggtgccgaagcacccgctcgtcgaccagacg
ctcgacgactgcctgcacgacgcgatggacaccgagggctggctcgcgctgctgcggcgg
atcgaggcgggcgacgtcgcgctcgtcgcgcgcgatctgcccgcgccttcgccgctcgcc
gccgagatcctgaacgcgaagccgtacgcgttcctcgacgatgcgccgctcgaggagcgc
cgcacgcaggcggtgctcgcgcggcgctggagcgacccggaatcggccgacgatctcggc
gcgctcgacgcgggcgcgatcgaagcggtgcgcgacgaggcgtggccgctcgtgcgcgag
cccgacgagatgcacgacgcgctcgtcgggctcgcgtgcatcgccgacgacgaaatcgcg
tcgcacgacggctggcgcgcgtgcgtcgcgcagctcgcggcgggcgggcgcgcggcgcgg
ctcgcgctcgcgggcggccgcgggctgtggatcgcagccgagcgcgtcgcgtgcatgcgc
gcgctgtacggcgcggacgtcgcgctcgacccgccgctcgccccgccgcccggcttcgat
gcgccgtgggagcccgaggccgcgctcgtcgacgtgatccgcgcgcgcctcacgggtttc
gggccggtcacggccgccgcgctcgccgcgccgctcgcgctgcccgccgcgtcggtcgcg
atcgcgctcgccgcgctcgagcgcgagggctacgtgatgcgcgggcgcttcacgccgggc
gcgcgcgacgacgaatggtgcgagcggcacctgctcgcgcgcatccatcgctatacggtc
aagcgcctgcggcgcgagatcgagcccgtcgagctcgcggatttcatgcgcttcctgttt
cattggcagcgcgtcgcgcccgacacgcgcggcctgggcggcgacgcgctcgcggcggtc
gtccaccagctcgaaggtttcgaggcggccgcgagcgcgtgggaggacgaaatcctgccc
gcgcggctcgccgattacgtggcgggcggcctcgacgagccgtgccgcgccggcaagctg
acgtggacgcggctcggcgcgccggcgaaggccgcgagcgcgccggtgaagacgacgccc
gtcgtgctgttgccgcgccgcgagctcgcgatctggcaggcgctgcgcgatccggccgcg
cagccggcgctgtcggcacgcgccgaacgcgtgcgcgcgacgctcgccgcgtacggcgcg
atgttcttcgacgaactggccgcgcacgcgcggctgctgcccgtcgagctcgaacgcgcg
ctcggcgagctcgtcgccgcaggcctcgtcaacgcggacagcttcgcgggcctgcgcgcg
ctgctgcggccggccgcgcagcggccgtcgcgcgcacggcgcggcggcgcgctgatcggc
gggatggacgacgcggggcgctgggcgctcgtacagcggctgccgctcgcgccgctcgat
tttgtcgagggcggcagcgaagacgaagccgcaaatgatgacgatgccccgtccggcgac
ggcacgcccggcgccggccccgaagccgcgcgccgcggcggcgtgcgcgaaggcggcgcc
gaagccgatgcccgcatcgcgcgcgcgatgcgggccgcgccgccgcaagcgggccgccat
gcgatcgcgcccgccgcgctcgagcacgtcgcgcgcacgctgctgcgccgctacggcgtc
gtgttctggcgcctcctcgcatgcgaggccgaatggatgccgagctggcgcgagctgctg
cccgtctatcggcggctcgaggcgcgcggcgaaatccgcggcggccgcttcgtcgcgggc
ctcgcgggcgaacagttcgcgctgcccgacgcgatcccgatcctgcgcgagctccgccgc
cggccggccgaagggctgatgctgtgcgtgagcggcgccgatccgctcaatctgacgggc
acgctgctgcccggcgaacgcgtgcccgcgctcgcgggcaaccggatcctgttccgcgac
ggcgtgccgatcgcctcgctcgtcggcgggcagttcgcgttcgcgcgcgaactcgacgcg
ctcgcgcaggaccgcgcgcgggcgcgactcgcgcggcatcggtaa

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