Burkholderia pseudomallei HBPUB10134a: DR55_5307 Help Entry DR55_5307         CDS       T03422                                  Symbol uvrA Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism bpsh  Burkholderia pseudomallei HBPUB10134a Pathway bpsh03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:bpsh00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     DR55_5307 (uvrA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bpsh03400]     DR55_5307 (uvrA) DNA repair and recombination proteins [BR:bpsh03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      DR55_5307 (uvrA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       DR55_5307 (uvrA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ABC_tran UvrA_inter AAA_29 AAA_21 SMC_N AAA_16 nSTAND1 RsgA_GTPase AAA_22 AAA_33 AAA_25 AAA_23 NACHT Viral_helicase1 AAA_18 UvrA_DNA-bind nSTAND3 nSTAND_NTPase5 ATPase DnaJ_CXXCXGXG DUF4350 RNA12 YmcF-like Motif Other DBs NCBI-ProteinID:  AIP55224 LinkDB All DBs Position 2:complement(2444316..2450231) Genome browser AA seq 1971 aa AA seqDB search MSSSNLIRIRGARQHNLKHIDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETF SAYARQFLDRMDRPQVERVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAE LFDRRTARLVRHDTPETIYADLFARTQAHDPRIAITFAVELPENASDEEVEQWLSASGYT RVQARRDVASPTGPRKVLDVVADRFRLHQIDKARAIEAIEASLKRGGGRVSIYVLAQAPE GADGGAAQSQVWRYSTGLHDPDSDLRYADPQAALFSFNSAYGACETCRGFGRVIGVDLGL VIPDARKTLRGGAVKPMQTPAWKECQDDLMRYAAKANIRRDTPWAELTPAEQDWVINGSP DWNGKWQSQWYGVKRFFGYLESKAYKMHIRVLLSKYRSYTPCAVCGGARLKTEALLWRLG TKANADAVLASADRFMPRGVDWTRAQLEALPGLTVHDLMLLPIERIRRFFDDISLPSALL DDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLTKTLFVL DEPSIGLHPRDLNRIVEAMRRLRDAGNTLVVVEHDPSVMLAADRLIDMGPGPGERGGTIV YDGTPGAIRSARTLTGEYLGGRKHVAHASNWARRPVDARTPRIVLEGASEHNLRDVTVEI PLQRLVCVTGVSGSGKSTLLQDVLYPAMARHFGKATESPGAYRRLAGAEQVGDVVFVDQS PIGKTTRSNPASYVGAFDEIRKLFAKAPLALQRGYSAGTFSFNSGDGRCPSCGGSGFEHI EMQFLSDVYLRCPDCDGSRYRAEILEVRIERGGRALSVADVLDLTVSEAAACFAADADVL RVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAKARDGRRVVTEEARVARAR LFMFDEPTTGLHFDDIAKLMQAFGKLLASGHSLIVIEHNLDVIRAADWLIDLGPEGGDGG GLVLCAGTPDDVKACAGSHTGAALRQYERAMNVGADADASGDAGVPLQAALNAARARRAI EGENVVRIVNAREHNLKALDVDIPHGKFNVVTGVSGSGKSTLAFDILFHEGQRRYLESLN AYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGLQ HCIHDGTPVTSQTVESIAAQLLRDHRGEHVGLLAPLVVNRKGVYTDLAKWAKARGNTHLR VDGEFVTVDPWPKLDRFREHTIELPVADLVVSPDNEAELRQRLDETLELGKGVMHLLAPL DGLRHAMDNRLCTAGVGAIKVLSVKRACPVCGTSYPELDPRMFSYNSKHGWCTTCVGTGL ALTREQRAAYDDTVLAEDGRGREQTLPSDEQEPEGVGDEPCPDCGGTRLNPSARAVTFGR HSIVDVAQWTVTDTRRWIEGLQLAGRDAQIARDIVGEIGSRLAFLEEVGLGYLSLDRAAP SLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLSALRKLGDKGNTLVVVE HDEDTIRRADHIIDIGPGAGKRGGTLVAQGGVADLSAQSASVTGRLLAQPMTHPLQPRRS VNPPGKRNGHAVPQAWLTVHRARLHNLRDVTVGIPLARLVAVTGVSGSGKSTLARDVLMT NLLDAVGRSVLSSPAARRARKAAQQDAPRAAKSRASVLARSAPRPVLNVTHAWQGCESIS GWEHIDRVLEVDQTPIGKTPRSCPATYIGVWDAIRRLFADTLEARARGYTASRFSFNTGE GRCPACEGQGVRTIGMSFLPDVKVPCDVCHGQRFNPETLAVTWRGRNIGDVLTMEIDEAV EFFAPLSNIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDVTRRGQK APHTLYVLDEPTVGLHMADVAKLIRVLHRLVDAGHSVVVIEHDLDVIAEADWIVDLGPEG GAGGGTIVAAAPPEGLVEVSASHTGRALGAVLARTGADRDEPLRSGTARAG NT seq 5916 nt NT seq  +upstreamnt  +downstreamnt ttgtcatccagcaatctgatccgcattcgcggagcacgtcagcacaatctcaagcatatc gatctcgacctgcgcaccggcgaaatgacggtcgtcaccggcccgtcgggctccggcaag tcgagcctcgtgttcgacaccctgtacgcggagggccagcggcgctacgtcgagaccttc agcgcgtatgcgcggcagtttctcgaccggatggaccggccgcaggtggagcgcgtcgac ggcgtgccgcccgcgatcgcgatcgaccagacgaaccccgtgcgcagctcgcgctcgacc gtcggcacgatgaccgagctcaacgatcatctgaagctcctgtacgcgcgcgcggccgag ctgttcgatcgccggaccgcgcggctggtgcggcacgacacgccggagacgatctatgcg gatctcttcgcgcgcacgcaggcgcacgacccgcgcatcgcgatcacgttcgccgtcgaa ctgccggaaaacgcgtccgacgaggaagtcgagcagtggctgtcggcgagcggctatacg cgcgtgcaggcgcggcgcgacgtcgcgtcgcccaccgggccgcgcaaggtgctcgacgtg gtggccgaccgcttccggctgcatcagatcgacaaggcccgcgcgatcgaggcgatcgag gcgtcgctcaagcgcggcggcgggcgggtgagcatctatgtgctcgcgcaggcgccggaa ggcgcggacggcggcgcggcacagtctcaggtgtggcgttactccaccgggcttcatgac ccggacagcgatctgcgctacgcggatccgcaggcggcgctgttctccttcaactcggcg tacggcgcgtgcgagacgtgccgcggcttcggccgcgtgatcggcgtcgatctcggcctc gtgattcccgacgcgcgcaagacgctgcgcggcggcgccgtcaagccgatgcagacgccc gcgtggaaggagtgccaggacgacctgatgcgctatgcggcgaaagcgaacatccggcgc gatacgccgtgggcggagctcacgcccgccgagcaggactgggtgatcaacggctcgccg gactggaacggcaaatggcagagccagtggtacggtgtgaagcgcttcttcggctatctc gaatcgaaagcgtacaagatgcacatccgcgtgctgctgtcgaaataccgcagctacacg ccgtgcgcggtgtgcggcggcgcgcgtctgaagacggaggcgctgctgtggcggctcggc acgaaggcgaacgccgacgcggtgctcgcgagcgccgatcgcttcatgccgcgcggcgtc gactggacccgcgcgcaactcgaggcgctgccgggcctgacggtgcacgacctgatgctg ctgccgatcgagcggatccgccgcttcttcgacgacatcagcctgccgagcgcgctgctc gacgatgcgctgaagctgctgctcgccgaggtgcgcacgcggctgaagtacctgtgcgac gtggggctcggctacctgacgctcgaccggcagagccgcacgctgtcgggcggcgaggtg cagcggatcaacctgacgacggcgctcggcacgtcgctcaccaagacgctgttcgtgctc gacgagccgagcatcgggctgcatccgcgcgacctgaaccggatcgtcgaggcgatgcgg cgcctgcgcgacgcgggcaatacgctcgtcgtcgtcgagcacgatccgtcggtgatgctc gcggccgaccggctgatcgacatgggccccggcccgggcgagcgcggcggcacgatcgtc tacgacggcacgcccggcgcgatccgctcggcccgcacgctgacgggcgagtatctcggc ggccgcaagcacgtcgcgcacgcgtcgaactgggcgcgccggccggtggacgcgcgcacg ccgcgcatcgtgctcgagggcgcgagcgagcacaatctgcgcgacgtcacggtcgagatt ccgttgcagcgcctcgtatgcgtgacgggcgtgtcgggttccggcaaatcgacgctgttg caggacgtgctctatccggcgatggcgcggcacttcggcaaggccaccgaatcgccgggc gcgtaccgccgcctcgcgggcgcggagcaggtgggcgacgtcgtgttcgtcgaccagtcg ccgatcggcaagaccacgcgctcgaacccggcgagctatgtcggcgcgttcgacgagatc cgcaagctgttcgcgaaggcgccgcttgcgctgcagcgcggctacagcgcgggcaccttc agcttcaactccggcgacggccgctgcccgagctgcggcggctccggcttcgagcacatc gagatgcagttcctgagcgacgtctacctgcgttgcccggactgcgacggcagccgctac cgggccgagatcctcgaagtgcggatcgagcgcggcgggcgcgcgctcagcgtcgccgac gtgctcgatctgaccgtcagcgaggccgcggcgtgtttcgccgccgacgccgacgtgctg cgcgtgctgcagccgatcgtcgacgtcggcctcgaatacgtgaagctcggccagccggtg ccgacgctgtccggcggcgaggcgcaacgcctgaagctggcgggctttctcgcggaatcc gcgaaggcgcgcgacgggcgccgcgtcgtcacggaagaggcgcgcgtcgcgcgggcgcgg ctcttcatgttcgacgagcccaccaccgggctgcatttcgacgacatcgcgaagctgatg caggcgttcggcaagctgctcgcgagcggccattcgctgatcgtgatcgagcacaatctc gacgtgatccgcgcggccgactggctgatcgatctcggcccggaaggcggcgacggcggc ggcctcgtgctgtgcgcgggcacgcccgacgacgtgaaggcctgcgccggctcgcatacg ggcgcggcgctgcggcagtacgagcgcgcgatgaacgtcggggccgacgccgacgcatcc ggcgacgcgggcgtgccgctgcaggccgcgctgaacgcggcgcgcgcgcgccgcgcgatc gaaggcgagaacgtggtgcggatcgtcaatgcgcgcgagcacaacctgaaggcgctcgac gtcgacattccgcacggcaagttcaacgtggtgaccggcgtgtccggctccggcaagtcg acgctcgcgttcgacatcctcttccacgagggccagcgccgctacctcgaatcgctgaac gcgtacgcgcgctcgatcgtgcagccggccgggcgccccgaagtcgacgcggtgtatggc attccgccgacggtggcgatcgagcagcggctgtcgcgcggcggccgcaagagcacggtc gcgacgacctccgaagtgtggcatttcctgcggctgctgtacgtgaagctcggccttcag cattgcatccacgacggcacgccggtgacgtcgcaaaccgtcgaatcgatcgccgcgcag ttgctgcgcgatcatcgcggcgagcacgtcgggctgctcgcgccgctcgtcgtcaatcgc aagggcgtgtacacggatctcgcgaagtgggcgaaggcgcgcggcaacacgcacctgcgc gtcgacggcgaattcgtgacggtggacccgtggccgaagctcgaccgcttccgcgagcac acgatcgagctgccggtggccgacctcgtcgtgtcgccggacaacgaggccgagttgagg cagcgcctggacgagacgctcgagctcggcaagggcgtgatgcatctgctcgcgccgctc gacgggctgcgccatgcgatggacaaccgcctttgcaccgccggcgtcggcgcgatcaag gtgctgtcggtcaagcgcgcatgcccggtgtgcggcacgagctacccggagctggacccg cggatgttctcgtacaacagcaagcatggctggtgcacgacctgcgtgggcaccggcctc gcgctcacgcgcgagcagcgcgcggcctacgacgacacggtgcttgccgaggacggccgc ggccgcgagcagacgctgccttccgacgagcaggagccggagggcgtcggtgacgagccg tgcccggattgcggcggcacgcggctgaacccgtccgcgcgcgcggtgactttcggccgc cattcgatcgtcgacgtcgcgcagtggaccgtgacggatacgcgccgctggatcgagggc ctgcagctcgccgggcgggacgcgcagatcgcgcgcgacatcgtcggcgaaatcggcagc cgtctcgcgtttctcgaggaagtcgggctcggctatctgagcctcgatcgcgcggcgccg agcctgtcgggcggcgaagcccagcgcatccggctcgcggcgcagctcggcagcaacctg cagggcgtgtgctacgtgctcgacgagccgacgatcggcctgcatccgcgcgacaaccag atcctgctgagcgcgctgcgcaagctcggcgacaagggcaacacgctcgtcgtcgtcgag cacgacgaagacacgattcgccgcgccgatcacatcatcgacatcggcccgggcgccggc aagcgcggcggcacgctggtcgcgcagggcggggtcgcggacctgtccgcgcagtcggcc tcggtgacggggcgcttgctcgcgcagccgatgacgcatccgctgcagccgcggcgcagc gtgaatccgccgggcaagaggaacgggcacgcggtgccgcaagcgtggctgacggtgcat cgcgcccggctgcacaacctgcgcgacgtcacggtcggcattccgcttgcgcggctcgtc gccgtgacgggcgtgagcggctcgggcaagtcgacgctcgcgcgcgatgtgctgatgacg aacctgctcgacgcggtgggccgctcggtgctgtcgtcgccggccgcgcggcgcgcacgc aaggccgcgcagcaggacgcgccgcgggcggcgaagagccgcgcgagcgtgctcgcgcgc agcgccccgaggcccgtgctgaacgtcacgcatgcgtggcaaggctgcgagtcgatcagc ggctgggagcatatcgaccgcgtgctcgaagtcgaccagacgccgatcggcaagacgccg cgctcgtgcccggcgacctacatcggcgtgtgggacgcgatccgcaggctgttcgcggac acgctggaggcgcgcgcgcgcggctacacggcgtcgcgtttctcgttcaacaccggcgaa gggcgttgccccgcatgcgaagggcaaggcgtgcgcacgatcggcatgagcttcctgccc gacgtgaaagtgccgtgcgacgtgtgccacgggcagcgtttcaacccggagacgctcgcg gtgacgtggcgcggccggaacatcggcgacgtgctgacgatggagatcgacgaagcggtg gagttcttcgcgccgttgtcgaacatcgcgcatccgctgcaactgatgaaggacgtcggc ctcggttatctgacgctcggccagccgtcgccgacgctgtccggcggcgaggcgcagcgc atcaagctcgtcaccgagctgagcaaggtgcgcgacgatgtcacgcggcgcggccagaaa gcgccgcacacgctgtacgtgctcgacgagccgaccgtgggcctgcacatggccgacgtc gcgaagctgattcgcgtgctgcaccggctcgtcgacgcggggcacagtgtcgtcgtgatc gagcacgacctcgatgtgatcgcggaggcggactggatcgtcgatctcggcccggagggc ggtgcgggcggcggcacgatcgtggcggccgcgcctccggaagggctcgtggaggtgagc gcaagccatacggggcgcgcgctcggggccgtgctggcgcgaacgggcgcggaccgggac gaaccgctgcgaagcgggacggcgcgcgccggttga

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