Burkholderia pseudomallei HBPUB10134a: DR55_5668
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Entry
DR55_5668 CDS
T03422
Name
(GenBank) RHS repeat-associated core domain protein
Organism
bpsh
Burkholderia pseudomallei HBPUB10134a
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
EndoU_bacteria
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-ProteinID:
AIP54969
LinkDB
All DBs
Position
2:2878022..2882593
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AA seq
1523 aa
AA seq
DB search
MALPAVKHLDPVVGIDVHSVLVTPGTPPVFLPHPYVGFMLDRREYIDAALGVIGSIVFTF
TPLGKEADAGLKWAKKQAKAELMSDPLIAEGVKLGKEAAPVAGDIAGAVGAGVGMGSMMG
RPIFVNGFLRATAGTHSFHVPGLHFPLGESFAPPPEDFEPSNDGESYMGSRTVLANNDPM
SFMALPAMSCWSIGLEPPPHNGAHTQRTALSMPSSVMLPIPVGRPVLVGGPPVMNMAALA
SSLFKAFRGSDWAKALADKLHLKPGFLRCNVLRAEPVDAITGEVVVQQHDFTVPGRLPLV
WNRYYTSHDTYVGAVGIGWQTPADIRLELTRHEGAVGVVAYFPDHATAFDAIPDAAGWPA
RVYDWQHGQALYRQDDRLVLRTRAGFEYEFALPAHWQHALERLAEDATLTLPVERMADLN
GNAWVFERGLDSSLTRLVEWKAEEATGRMIACAASASSRAGDHVSLLTALTLIDAGGRAH
PLVSYQHDRNVDLVAAIDAMGQPHRYAYTDGHRMVRHTSARGVSFYYSHRQHDDGVWRVD
HAWGDNGLADYRFVYDVGHRETQITDSLGHVTILQANERGLPVARIDPLGAVTSYRYDAQ
GRTNAQTDPAGRTITWRYDAYGNLLMQTLPDRSVVRAEYNADHKPICLTVPGDRQWRYAW
DKRGNLVAQTTPTQASMRYGYDRHGQLVAHMGPRGAVTRFDYDHDGNLSAVVDALGHLTR
YTHDARANLIHTVNALGQVSRYEYDRNGNLTRAIEPGGREIFCRYDSSGNLTRYRDPNGQ
VTQLEYSPLRQIAKRLTPDGGVVEYRYDTEERLIGVVNERGELYQLKRDALGRIVEEIDY
WGQSRRYQYGAAGELLRSVDPLGQAIDYETDVLGRIVKKRVPDPRQPGGIRTETFSYDRS
GNLIVAENPDSRVELAYDAAGRVVEERQGDDFVIAHAYDAAGNRIERRTRLNAGGEVIAH
TVRYDYNALGAVSSIQIDDAAPITFERDALGQIRVEHLRAELRRELSYTLDGLLAKQTLL
AGTGVLFASEYAYDANGEMLGKRDSRFGIEGYQYDPMGRLTGHLDPTGKLREFSYDSAGD
LLKTHFRCGRLTEIVNQGTEARDWIRDGEYDGCYWAYDQLGNLVRKRELQQDLVLQWDAQ
ELLIESLIVRSPSADPESGGDVPDVRTHYAYDAFHRRTRKIAHVVRDAGTQTAAKSDATV
LRRVSRFFWDGDALAGELAEIDGAQRVAAGNWEHREWIYYPDTFVPLVSVIDAGTSCDLS
RNRHGCRIFYYRYDANGRPTQMTDSSGREVWATGYDENGRLVPINADIYNPIHLQGQYRD
AETGLHYNRHRYYDPALGSFISKDPLGLAAGVNLYRYAPNSIGWADPLGFQAKPSPNNNN
LPWDFRHIFGELDLNRNPPLRGFHINRPGRQIINYWSTFPTGRYLARVIPLGGPCVHGAY
QGDVQIDGDNGWQTVANNKSFFPDNWNGAELRRQLQSIDTNDPSQWFFDSGTRKFKATTP
SGLRIAGFFDRNEGAYRPFPECC
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
gtggcactacccgctgtcaagcatctggaccccgtggtcgggatcgatgttcattcggta
ctggtcacacccggtacgccgccggtgttcctgccgcatccctacgtcggtttcatgctc
gatcgccgcgagtacatcgacgccgcgctgggcgtgatcggcagtatcgtgtttacgttt
acacccctcggcaaggaggcggacgccggtctgaaatgggcaaagaagcaggcgaaggcc
gaactgatgagcgacccgctgattgccgaaggcgtgaagctcggcaaggaagcggctccc
gttgctggcgacatcgccggcgcggtcggcgctggtgtagggatgggaagcatgatgggc
cgccccatcttcgtaaacggcttcttgcgggccacggcgggtacccattcgtttcacgtg
ccgggcctgcatttcccgttgggcgaatcgttcgcaccgccgccggaggattttgagcct
tcgaacgacggggagtcgtacatgggcagcagaacggtgctcgccaacaacgatccaatg
tcgttcatggcgctgccggcgatgagctgctggtcgatcgggctggagccgccaccgcat
aacggtgcgcacacgcagagaacggcgctgtcgatgccaagttcggtgatgctgccgata
ccggtggggcggccggtgctggtgggtgggccaccggtcatgaacatggcggcactggct
tcgtcgctgttcaaggcctttcgcggaagcgactgggccaaggcgctggccgacaagctg
catctgaaacccggtttcctgcgctgcaatgtgctgcgcgcggagccggtggacgcgatc
acgggtgaggtcgtggttcagcagcatgacttcacggtccccggccgcctgccgctcgtg
tggaaccggtattacaccagccacgacacctatgtcggtgcggttggtattggctggcag
acgcctgccgatatccggctcgaactgacccgacatgaaggcgcggtgggggtagtggcg
tatttcccggatcacgcgacggctttcgatgcaataccggatgcagccgggtggccggcg
cgtgtgtatgactggcagcacggacaggcgctatatcggcaggacgaccggctggtcctg
cgcacgcgtgccgggttcgaatatgagtttgcgttgcccgcacactggcaacacgcgctg
gagaggctcgcggaagacgccacgttgacgcttcctgtcgaacggatggccgacctcaac
ggcaatgcgtgggtgttcgagcggggactggacagcagcctgacgcgtctggtcgagtgg
aaggccgaggaggcgaccggccgcatgatcgcgtgcgcggcgagcgcaagcagccgggcg
ggagaccacgtaagtctcctcaccgcgctgaccctgatcgatgccggcggccgcgcgcat
ccgcttgtcagttaccagcacgaccgaaacgtcgatctggtcgccgcgatcgatgcgatg
ggccagccgcatcgttacgcctacaccgatgggcaccggatggtgcgtcacacaagtgcg
cgaggagtgtccttctactacagtcatcggcagcatgacgatggggtgtggcgggtcgat
cacgcgtggggcgacaacggccttgctgattaccgctttgtttacgatgtcgggcatcgg
gaaacgcagatcacagattcgctagggcacgtgacgatcctgcaggcgaacgagcgcggc
ctgccggtggcgcgaatcgatccgctgggggcggtgacgagttaccggtacgatgcgcag
gggcgcacgaacgcacaaaccgatcccgccgggcgcactatcacctggcggtacgatgcg
tacggcaatctgcttatgcagacgctgccggacaggagtgtcgtacgtgccgagtacaac
gcggaccataagccgatttgcctgacagtgccgggtgacagacaatggcgctatgcgtgg
gataaacgaggcaacttggtcgcgcagacgacgccgacgcaggcaagtatgcgctacggg
tatgaccggcatggtcaactcgtagcgcatatgggaccgcgcggagcggtgacgcgcttt
gactacgatcacgatggcaatctctcagcggtcgttgacgcgctcgggcatctcacccgg
tacacgcacgatgcacgcgcaaaccttattcataccgtcaacgcgttgggtcaggtgagc
cgttacgaatacgatcgtaacggcaacctgacgcgggcaatcgagcccggcgggcgagag
atcttttgccgctatgactccagcggcaacctgacgcgctatcgcgatccgaatggccag
gtcacgcagctcgaatattcgccgctgaggcagatcgccaagcggctgacgccggacggc
ggtgtggtcgaataccggtacgacaccgaggagcggctgattggcgtggtgaacgagcgc
ggcgaactgtatcagctgaagcgtgacgcgttgggacggatcgtggaagagattgattac
tggggccagtcgcggcgctaccagtacggtgcggcgggcgagctcctgcgcagcgtcgat
ccgctggggcaggcgatcgactacgaaacggatgtccttggccgtatcgtaaaaaagcgc
gtgccggatccgcggcaacccggcgggatccgcaccgagacgttctcgtacgatcgcagt
ggtaacctgatcgtcgcagaaaatccggatagccgggtcgagctggcttatgacgcagcc
ggccgcgtggtggaggaaaggcagggcgacgatttcgtgatcgcgcacgcgtacgacgca
gcgggcaaccggatcgaacgccggactcgactcaacgcgggcggcgaagtcatcgcgcac
accgttcgctatgactataacgcgctcggcgcagtcagctcgatccagatcgatgacgcg
gcgcccatcaccttcgagcgtgatgctcttgggcagatccgcgtcgagcatcttagggcc
gagctgcgacgcgagctatcgtatacgttggatgggctgctggcgaagcagacgctgctc
gccggtaccggtgtgctgttcgccagcgaatacgcgtacgacgcgaatggtgaaatgctt
ggaaagcgtgactcccgcttcggcatcgagggttaccagtatgatccgatgggcagactg
accgggcacctcgatccgaccggcaagctgcgcgagttctcgtacgattcagctggcgac
ctactcaagacgcatttccgatgtggacggctaacggaaatagtgaaccaagggacggag
gcccgggattggatccgtgatggagagtacgacggctgctattgggcgtacgaccagctc
ggcaatctcgtacgaaagcgagaactgcaacaggatttagtgcttcagtgggacgcgcaa
gaactacttatcgaatcgctgatagtgcgatctccgtcagcggaccctgaatcgggaggc
gacgtccctgacgttcgcacgcactatgcctacgatgcatttcatcgccgaaccaggaag
attgcgcacgtggtgcgtgatgccggaacgcagacggcggccaaatctgatgcgacggtg
cttcggcgtgttagccgttttttctgggatggcgatgcacttgcaggcgaacttgctgag
atcgatggagcacagcgcgtggccgccgggaactgggaacaccgagaatggatctactat
ccggacacattcgtgccgctagtgtccgttatcgatgctggaacatcgtgtgacctatct
agaaatcgacacggttgtcgaattttctactatcgatatgatgcaaatgggcgcccgacg
caaatgaccgactccagcggacgcgaagtttgggcaacgggttacgacgagaacggaagg
cttgtcccaataaacgcggacatctacaacccgattcaccttcaggggcagtatcgggat
gcagagacagggctccattacaatcggcatcgatactacgatccagctctcggaagcttc
atatccaaagatccattggggctggccgctggggtcaatttatatcgttacgcgccgaat
tcaatagggtgggccgacccgcttggctttcaagccaagccatctccgaataataataat
ttgccgtgggattttaggcatatttttggggagctcgatctaaatcgcaatccgccactt
cgcggcttccacattaatcgccccgggcggcaaattattaactactggagcacgtttccc
accggtcgctacctcgctcgcgtgattccgcttggcgggccctgtgtacatggagcatac
caaggagatgtccaaatcgacggcgacaacgggtggcaaaccgttgccaataataagagt
ttcttccctgataactggaatggtgctgaattgcgaaggcaattacaatcaattgataca
aatgacccatcacaatggttctttgatagcggaacacggaaatttaaggccacgacaccg
tccggactccggattgccggattcttcgatcgaaacgagggagcataccgaccttttcca
gaatgttgttga
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integrated database retrieval system
