Burkholderia pseudomallei HBPUB10134a: DR55_954
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Entry
DR55_954 CDS
T03422
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K03086
RNA polymerase primary sigma factor
Organism
bpsh
Burkholderia pseudomallei HBPUB10134a
Pathway
bpsh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpsh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DR55_954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpsh03021
]
DR55_954
Transcription machinery [BR:
bpsh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DR55_954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_23
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AIP52169
LinkDB
All DBs
Position
1:1110851..1112299
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AA seq
482 aa
AA seq
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MKVSARELRYEQGIDRLLELAGARDDTEYADVADEFASAPSSAFAHDLGEPDSLDHQASD
ESAGAGSFGDKPTRPAHGDTDVDTDWRDDDAPPSGSNDAAPVDTTASTDPLALFVRRMHA
VPLLTHAQEIALAAEIEAGREQVLQALAEALDRLDLASLPADPALGRARAALQRARARGD
EGARAFARARTAAYAALAAHGWPSAEVDAVRRAMRRLPTSPEKSDAGAQRAFADGEARIS
AATARMAEANLRLVLSIARKYASRGLDLADLLQEGNLGLLRAIEKFEHRRGFKFSTYATW
WIRQAISRAIADRARTIRVPVHVGDEARRVRKAADRIERRSGVSASLAELSEATGLPAER
LRAVLTLPREPRSLNAPLGDDDQAEFGDIVEDTSTPSLFDALAHGQMCDVVTSLLKTMSA
QEADILRRRFGIGGDEPWSYEQIAARAGVSREQVRRIEKRALQTLRVTAEACNAHDFLDV
QP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtctcagcgcgcgaattgcgctacgaacagggcatcgaccggttgctcgaactt
gccggcgctcgcgacgacacggaatacgccgatgtcgccgacgagttcgcgagcgcgccg
tccagcgcgttcgcgcatgatctcggcgagcccgattccctggatcaccaagcatccgac
gaaagcgcaggcgccggctcgttcggcgacaagccgacgcggcccgcgcacggcgacacc
gatgtcgacaccgactggcgtgacgacgatgcgccgccctccggatcgaacgacgccgcg
ccggtcgacaccacggcctcgaccgatccgctcgcgctcttcgtacgccggatgcacgcg
gtgccgctgctgacgcacgcccaggaaatcgcgctcgccgccgaaatcgaggcgggacgc
gagcaggtgctgcaagcgctcgccgaagcgctcgaccggctcgacctcgcgtcgttgccg
gccgatccggcgcttggccgtgcgcgcgccgcgctgcagcgcgcacgcgcgcgcggtgac
gaaggcgcgcgcgcgtttgcccgcgcgcgcacggcggcatacgcggcgctcgccgctcac
ggctggccgtcggcggaagtcgacgcggtgcggcgggcaatgcgccggctgccgacatcg
ccggaaaagagcgacgcgggcgcgcaacgtgcgttcgcggacggcgaagcgcgcatctcg
gccgcgaccgcgcgaatggcggaagcgaacctgcggctcgtgctgtcgatcgcgcgcaag
tacgcgtcgcgcggcctggatctcgccgatctgctgcaggaaggcaacctcggcctgctg
cgcgcgatcgagaaattcgagcatcggcgcggcttcaagttttcgacgtatgcgacgtgg
tggattcgtcaggcgatttcacgcgcgatcgccgaccgcgcacgcacgattcgcgtgccg
gttcatgtcggcgacgaagcgcgccgcgtgcgcaaggccgccgatcggatcgaacggcgc
agcggtgtaagcgcatcgctcgccgagctatcggaggcgaccgggctgccggccgagcgg
ctgcgcgcggtgctgacgctgcctcgcgagccgcgctcgctgaacgcgccgctaggcgat
gacgaccaggccgaattcggcgacatcgtcgaggatacgtcgacgccgagcctgttcgat
gcgctcgcccacgggcagatgtgcgacgtcgtcacgtcgctgctgaaaacgatgtccgcg
caggaagccgacatcctgcgccggcgcttcggcatcggcggcgacgagccgtggagctac
gagcagatcgccgcgcgagcaggcgtgtcgcgcgagcaggtacgccgcatcgagaagcgc
gcgctgcagacgctgcgcgtgacggccgaagcgtgcaacgcgcacgacttcctcgacgtg
cagccgtaa
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