Basilea psittacipulmonis: IX83_01930
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Entry
IX83_01930 CDS
T03226
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bpsi
Basilea psittacipulmonis
Pathway
bpsi03030
DNA replication
bpsi03430
Mismatch repair
bpsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IX83_01930
03430 Mismatch repair
IX83_01930
03440 Homologous recombination
IX83_01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsi03032
]
IX83_01930
03400 DNA repair and recombination proteins [BR:
bpsi03400
]
IX83_01930
Enzymes [BR:
bpsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IX83_01930
DNA replication proteins [BR:
bpsi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IX83_01930
DNA repair and recombination proteins [BR:
bpsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IX83_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_14
AAA_18
AAA_5
AAA_16
DNA_pol3_a_NII
TsaE
AAA_2
PIF1
DUF3646
AAA_19
AAA_30
nSTAND3
Mg_chelatase
AAA_28
DYNC2H1_AAA_dom
Motif
Other DBs
NCBI-ProteinID:
AIL32235
UniProt:
A0A077DBP5
LinkDB
All DBs
Position
416435..418603
Genome browser
AA seq
722 aa
AA seq
DB search
MTYLALARKWRPKDFSSLVGQEHVVRALTNSLETGRLHHAWLFTGTRGVGKTTLSRILAK
SLNCIKGVTASPCGVCEICKEIDEGRFIDYLEFDAASNRGVSEVEEILEQALYAPTQGRY
KVLMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNLKQMPV
EAIVPYLQNVLTQEGITFELPALRLLGKAAAGSMRDALSLTDQAIAYSSGNITQQSIQEM
FGSIDQTYLAQFIKGLLEQDAHLLIQTAKDLLLRGFSYANTLEDLAELFSLIAVEQRLPG
STSESEPLREAIIEFAKVFPADALQLCYSVALHGRSELTISPDEYAGFVMTILRMLSLME
SANIEKKNIDIPSHSLTTKEKVVSEQVVTASPATEPSMTSPVTQDVPVTQNAVSKATPSA
SPATKPSVTSPVTQDVPVTQNAASKPTPSASPVTEPSATSVVTQDVPVTQNAASKPTPSA
SPATEPSATSVVTQDVPVTQNAASKPTPSASPATEPSATSPVTQDVPVTQVLSSTEDNAV
SSDSEGLNDVFMSAPTEMLDQWADSGDAFQDYPAQWDNESAYDVEQSNAHVQEQLIHMTP
DSWVSITQSLPRNSFISELLRHSEWEKYQDKTIYIKANWESNQVKDTQQKLSTLLTEYFQ
TPLNVVLIHAEVEHTAHTKNVAARKAKQEKAVEWAKRSPIVRELIEQFNGELIESSIQVV
GE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacatatttagcattagctcgaaagtggagaccaaaagatttctctagtttggtggga
caagaacatgtggtgcgtgcgttaacgaactctttagagacaggaagattgcaccatgca
tggctatttactggaactcgaggagtaggtaaaacaacattatcccgcattttggctaaa
tcgttaaattgcataaaaggggtgaccgcttcgccatgtggggtgtgtgaaatatgtaaa
gagatcgatgagggacgttttatcgattatttggagttcgatgcagcgtctaatcgaggt
gtttcagaagttgaagagattctggaacaagcactttacgccccgacccaaggccgatac
aaggtattgatgatcgacgaggttcatatgttaacgaaccacgcatttaatgccatgtta
aagacattggaagagccacctgaacatgtcaagtttatcttagcgactaccgatcctcaa
aaaatccctgttacggtgttatcacgttgtctccaatttaacttgaaacaaatgcctgtt
gaggcaatcgtaccgtatttgcaaaatgtgttaacccaagaggggataacatttgaatta
cctgccttgagattactcggcaaagcagccgctggatctatgcgtgatgccttgtcttta
actgatcaagcgattgcttatagctcgggaaatattacccaacaatcgatccaagagatg
tttggatcaattgatcaaacttacttagcccaatttatcaaaggattattagaacaagat
gcacatcttttgattcaaacagccaaagacctgttattaagaggcttttcatatgcgaat
acgctagaagatttggctgagttgttttcgctgattgctgtggaacaacgactaccaggt
tccacgtcggaatctgaacctttgcgtgaggcgattattgagtttgcaaaagtattccct
gcagatgctttgcagttatgttatagcgtggcacttcatggacgttcagagttaacgatt
tctcccgatgagtacgctggttttgtcatgaccattttaagaatgttgtcattgatggaa
agtgcgaatatcgaaaaaaaaaacattgatatccccagccactctctaacgacaaaggaa
aaagtagtttctgagcaagtcgtcactgcttctccagccactgaaccatctatgacttcg
cctgtaacacaggatgtgccagtgacacagaatgcagtgtctaaagcgacaccatctgcc
tctccagccactaaaccatctgtgacttcgcctgtaacacaggatgtgccagtaacacag
aatgcagcgtctaaaccgacaccatctgcctctcccgtcactgaaccatctgcgacttcg
gttgtgacacaggatgtgccagtgacacagaatgcagcgtctaaaccgacaccatctgct
tctccagccactgaaccatctgcgacttcggttgtgacacaggatgtgccagtgacacag
aatgcagcgtctaaaccgacaccatctgcttctccagccactgaaccatctgcgacttcg
ccggtaacacaggatgtgccagtgactcaagtgttgtcgtcaacagaagataatgcggta
tcctcagattcagagggtttgaatgatgttttcatgtcggctccaactgaaatgctggat
caatgggctgattcaggagatgcgtttcaagattatcccgcacaatgggataatgaaagt
gcttatgatgtggaacagtcaaatgctcatgttcaagaacagcttattcatatgacccct
gattcttgggtaagtatcacacagtccttgcctagaaatagttttatatctgaattgtta
agacattccgagtgggaaaagtatcaagacaaaacgatatatatcaaagcaaattgggaa
agcaatcaagtaaaagatacacaacaaaaattatctacgttactgacagaatattttcaa
acgcctttgaatgtggtgttgatacatgctgaggttgaacataccgctcatacaaaaaac
gtcgcggctagaaaagccaagcaggaaaaagcggtagagtgggcaaaacgttcaccgatt
gttcgagaattaatcgaacagtttaatggagagttaattgaatccagtattcaagtagta
ggtgaatga
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