Basilea psittacipulmonis: IX83_08260
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Entry
IX83_08260 CDS
T03226
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bpsi
Basilea psittacipulmonis
Pathway
bpsi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpsi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IX83_08260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpsi03021
]
IX83_08260
03400 DNA repair and recombination proteins [BR:
bpsi03400
]
IX83_08260
Enzymes [BR:
bpsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IX83_08260
Transcription machinery [BR:
bpsi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IX83_08260
DNA repair and recombination proteins [BR:
bpsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IX83_08260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
AAA_lid_4
Ribosomal_TL5_C
DUF4843
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AIL33290
UniProt:
A0A077DEM7
LinkDB
All DBs
Position
complement(1859241..1860221)
Genome browser
AA seq
326 aa
AA seq
DB search
MSQNFLKPRAIEVEPKGKHHARVVMEPFERGFGHTLGNALRRILLSSMTGYAPTEVKIEG
VVHEYSTIPGVSEDVVDILLNLKGAVFKLHGRERVEVTISKSTPGPVKVSDINLPHDVEV
LNPDHVIANLVEGGKLEMTIVVEQGRGYVPGNVRALQDDRSHSIGRIVLDASFSPVRRVS
YYVENARVEQRTDLDKLIMDIETNGVISPEEAVRQSARILMDQISVFAALEGATEIGETP
RRGTPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLTE
IKDVLAARGLTLGVKLENWPPVDLDR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaactttctaaaacctcgtgctatcgaggtagaaccaaaaggtaaacaccat
gctcgtgtcgtgatggagccttttgaacgtggcttcggtcatacgttaggtaacgcatta
cgccgtattttgctttcttctatgacaggttatgcaccgacagaagtaaaaatcgaaggc
gtagtacatgagtactctacgattcctggtgttagcgaagatgtcgttgatattttgtta
aatctaaagggtgctgtatttaaacttcacggtcgtgaacgtgtggaagtgacgatttct
aaatcgacacctggtcccgtaaaagttagtgacattaatttacctcatgatgtggaagtg
ttaaatcccgatcatgttatcgctaacttggttgaaggcggtaagcttgagatgacgatt
gtggttgaacaaggacgtggttatgttcctggtaacgttcgtgcattacaagatgatcgt
tctcatagcatcggacgcatcgtgttagacgcttcatttagtcctgtacgtcgtgtgagt
tattacgttgaaaacgctcgtgttgaacaacgcacagacttggacaaacttattatggat
attgaaacgaatggcgttatttctccagaagaagctgttcgtcaatctgctcgtattttg
atggatcagatctctgtctttgcggcactagaaggtgcaacagaaatcggtgaaacacca
cgtcgtggcacaccacagatcgatccagtacttctacgtccagtagatgatttagaattg
acagtacgttctgctaactgcttgaaagcagaaaatatctactacattggtgatttgatc
caacgtactgaaaacgaattgctgaaaacacctaaccttggtcgtaagtcattgactgag
attaaagatgttttagctgctcgtggtctaacattaggtgtgaagttagaaaactggcca
cctgttgatttagatcgttaa
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