Basilea psittacipulmonis: IX83_08660
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Entry
IX83_08660 CDS
T03226
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bpsi
Basilea psittacipulmonis
Pathway
bpsi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpsi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IX83_08660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpsi03021
]
IX83_08660
03400 DNA repair and recombination proteins [BR:
bpsi03400
]
IX83_08660
Enzymes [BR:
bpsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IX83_08660
Transcription machinery [BR:
bpsi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IX83_08660
DNA repair and recombination proteins [BR:
bpsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IX83_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Biotin_lipoyl_2
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AIL33362
UniProt:
A0A077DIR3
LinkDB
All DBs
Position
complement(1936435..1940736)
Genome browser
AA seq
1433 aa
AA seq
DB search
MKSIAGLFKQINQDTTFDAIKIGIASPEKIRSWSYGEVKKSETINYRTHKPERDGLFCAR
IFGPVKDYECLCGKYKGPGRRGIICEKCGVEVTDSKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAWCVIEPGMTPLSRGQIMSDVDYVQKVEEYGDDFVALM
GAEAIAELLRTIDVDAEIENLRAELKVTGSEAKIKKISKRLKVLEGFQRSGMKPEWMIME
VLPVLPPDLRPLVPLEGGRFTVSDLNELYRRVINRNNRLKRLLESNAPDIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKHQLKSLSDVIKGKSGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKLMALELFKPFIANRLISMGLATSLKPANRLVDAQEPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLEA
RTLMLASNNILFPANGEPSIVPSQDMVLGLYYTTRERINAKGEGMFLADLAEVQRALDNG
EVELQTRITVRLPEYFKDENGEWTSKLKRVETTVGRALLSEILPKGLPFEVLNKPLKKKE
ISRLINQSYRRCGLRDTVILADQLMANGYRLATRAGISIAMEDMLIPDSKEKILSEAMTE
VREIERQHASGLVTAQERYNNVVDIWGKAGDRVSKAMMEKLATEPVIDRFGQEVRQESFN
SIYMMADSGARGSVTQMRQLAGMRGLMSKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVTQDLVITEDDCGTTDGYLMKALVEGGEVVEPLRDRIL
GRVAAVDIIHPDTQETIIYAGTLLDEDKVELIDKIGIDEVKIRTPLTCKTRHGLCAHCYG
RDLGRGSMVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVETKSAGTVGF
ASSMRYVTNAKGERIAISRSGEVMIFDDNGRERERHKLPYGATVLVGDGEVVKAGARLAT
WDPLTRPIISEYQGKVRFENIEEGVTVARQMDEVTGLSTLVAITPKSRGGKTAARPLMKL
INDDGEEIKMAGTDHPVSISFPVGALITVRDGQEVGVGEVLARIPQESQKTRDITGGLPR
VVEVFEARASKDSGILADVTGTISFGKDTKGKQRLVITETDGTTHEFLVPKEKQVLVHDG
QVVNQGELIVDGPANPHDILRLQGIEKLAAYIVNEVQDVYRLQGVKINDKHIEVIVRQML
RRVNIIDAGDTKFIPGEQVERSEMLNENDRVIAEGKVPATYENILLGITKASLSTDSFIS
AASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAYHQAIAQRAGTPASEIL
DEAYSSHSSGLENPFKEIDAEIDEIIPSDTNVNPFASMFIPTSSSDDEGQDEE
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcatagcaggtttattcaaacagataaatcaggacacaacatttgatgccatt
aagatcggtattgcgtctcctgaaaaaatccgttcatggtcatatggagaagtgaaaaaa
tcggagacgattaactatcgtacacataaaccagaacgcgatggtttgttttgtgcacgt
atttttggtccagtcaaagattacgaatgtttgtgtggcaaatataaaggacctggtcgt
cgcggtattatttgtgaaaaatgtggcgtagaagtgacggactcaaaagttcgtcgtgaa
cgtatgggtcatattgagttggctagtccagttgcccatatttggttcttgaagagcttg
ccttctcgtttaggtatggttcttgatatgacattacgtgacattgaacgtgtgttgtat
tttgaggcttggtgcgtgattgagccaggcatgacaccgttgtcacgtggtcagattatg
tctgatgtggactatgttcaaaaagttgaagagtacggtgatgactttgtggccttgatg
ggagcagaggcgatcgctgaattacttcgtacgattgacgtggatgcagagattgagaat
cttcgtgctgaattgaaagtaacaggttcagaagcgaaaatcaaaaagatttcaaaacgt
ctaaaagtattagagggtttccaacgatcaggcatgaagccagagtggatgattatggag
gtgttacctgtattgcctcctgatttacgtcctttggtgccgcttgagggtggtcgtttc
accgtttctgatttgaacgaattgtatcgtcgcgtgattaaccgtaacaatcgtttgaaa
cgtttattagaatccaacgcacctgatattatcgtgcgtaacgaaaaacgtatgttacaa
gaggcggttgattccttgttagacaatggtcgtcgtggtaaagcgatgacaggtgcgaac
aagcatcagttgaaatcattgtctgatgtgattaaaggtaagagtggtcgtttccgtcaa
aacttattgggtaaacgtgttgactactcaggtcgttcggttattgtggtgggtccacag
ttgaaattgcatcagtgcggtttgcctaagttgatggctttggaattgtttaagccgttt
attgctaaccgtttgatctctatgggcttggcaacgagcttgaaacctgctaaccgtttg
gtagatgcccaagaaccagttgtttgggacatcttagaagaagtgattcgcgaacaccca
gtaatgcttaaccgtgcaccgactttgcaccgtttaggtattcaagcgtttgaacctgtg
ttgattgaaggtaaagcgatccagttacacccattggtgtgtgcggcctttaacgccgac
ttcgacggtgaccaaatggcggttcacgtacctttgtctttggaagcacagctagaagca
cgtacattgatgttggcgtcaaataacattttgttccctgccaacggtgaaccttctatc
gtaccttctcaagatatggtcttgggtctgtactatacaactcgtgagcgtattaacgca
aaaggcgaggggatgttcttggctgatttggcagaagttcaacgtgctttagacaatggc
gaagtagagttgcaaacacgtattacggtacgtttgcctgagtatttcaaagatgaaaac
ggcgaatggacctctaaacttaaacgtgttgaaacaacagtaggtcgtgctttattaagt
gagattttgcctaaaggcttgccttttgaagtgttgaacaaacctttgaagaagaaagaa
atttctcgtttgatcaaccaatcttaccgtcgttgcggtttacgcgatacggtgatttta
gctgaccaattgatggcaaacggttatcgcttggctacacgtgcaggtatctcgattgcg
atggaagatatgttgattcctgactcaaaagagaaaatcctttcagaagcgatgacggaa
gtgcgtgagattgaaagacagcacgcgtctggtttggttaccgcccaagaacgttataac
aacgtggtggatatttggggtaaagctggtgatcgcgtctctaaagcgatgatggaaaaa
ttggcaacagagcctgtgatcgaccgctttggacaagaagtgcgtcaagagtcgtttaat
tcaatctatatgatggctgactcaggtgcccgtggttcggtgactcagatgcgtcagttg
gcgggtatgcgtggtttgatgtctaaacctgacggttcgattatcgaaacaccgattaca
gcgaacttccgtgaaggtttgaatgtattgcagtactttatttccactcacggtgcacgt
aaaggtctagcggatacggcgttaaaaacagcaaactctggttatttgactcgtcgtttg
gtggatgtgactcaagacctagtgatcacagaagatgattgcggtacgacagatggttac
ctcatgaaagccttggttgaaggtggtgaggtggttgagccattacgtgaccgtatttta
ggtcgtgtggcggcagttgatattatccatcctgatacacaagaaacgattatttatgcg
ggcactctattagacgaagataaagtagagttgatcgataaaattggtatcgatgaagtg
aagattcgcactccattgacatgtaagacacgtcatggtttgtgtgcacactgctatgga
cgtgacttgggtcgtggttctatggtgaatgcaggtgaagccgttggtgtgattgcagca
cagtctatcggtgaacctggtacacagttgacgatgcgtacgttccacatcggtggtgcc
gcatctcgtgcagccgtggcttcttcagtagaaacgaaatcagcaggtactgttggattt
gcaagtagcatgcgttatgtgacgaatgcaaaaggtgaacgtattgctatttctcgttct
ggcgaagtgatgatttttgatgataacggtcgtgagcgtgaacgtcataaactaccatac
ggtgcgacagtattggtcggtgatggtgaagtggtgaaagcgggtgctcgtttggcgaca
tgggatccattaacgcgtccaatcatttcggaataccaaggtaaagttcgctttgagaac
attgaggaaggtgttactgtggctcgccaaatggacgaagtaacaggcttgtcaactttg
gtagcgattacgcctaaatctcgtggcggtaagacagcggctcgtccattgatgaagtta
atcaatgacgatggtgaagaaattaagatggcgggtactgatcatccagtcagcatttct
ttcccagtcggtgcgttgattaccgttcgtgatggtcaagaagtcggcgtaggtgaagtg
ttggctcgtattcctcaagaatctcagaaaacaagagatattacgggtggtcttccacgc
gtggttgaggtctttgaggcacgtgcttctaaagattcaggtatcttggcagatgtgaca
ggtacgatttcttttggtaaggatacaaaaggtaaacaacgtcttgttattactgaaaca
gacggtacgacacatgaattcttagtacctaaagaaaaacaagtattagttcatgacggc
caagtggttaaccaaggtgagttgattgtcgatggtcctgcaaaccctcatgatattttg
agattgcaaggtatcgagaaattagctgcttatattgtgaacgaggttcaagacgtttat
cgtttacaaggggtaaaaattaacgacaaacacattgaagtgattgttcgtcagatgttg
cgtcgtgtcaatattattgatgcgggtgatacgaagtttattccaggtgaacaggtagaa
cgttcagaaatgttgaatgagaatgatcgcgtcatcgctgaaggtaaagtgcctgcgacg
tatgaaaatatcttattaggtattacaaaagcatctttatctactgattcgttcatctcg
gctgcatcgttccaagaaacaactcgtgtcttgaccgaagcggctatcatgggtaaacgt
gacgatttacgtggcttgaaagagaacgtaatcgtgggtcgtttgattcctgctggtaca
gggttggcttatcatcaagctattgcacaacgtgcgggaacccctgcatcagaaatctta
gacgaagcgtattctagccattcgtctggtttggaaaacccattcaaagagattgatgcc
gaaattgatgagattattccaagcgatacaaatgtgaacccatttgcatccatgttcatc
cctacttcatcaagtgatgatgagggacaagacgaagaataa
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integrated database retrieval system
