Burkholderia pseudomultivorans: WS57_19205
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Entry
WS57_19205 CDS
T04870
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bpsl
Burkholderia pseudomultivorans
Pathway
bpsl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpsl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WS57_19205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpsl03021
]
WS57_19205
03400 DNA repair and recombination proteins [BR:
bpsl03400
]
WS57_19205
Enzymes [BR:
bpsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WS57_19205
Transcription machinery [BR:
bpsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WS57_19205
DNA repair and recombination proteins [BR:
bpsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WS57_19205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AOI90936
LinkDB
All DBs
Position
1:1500607..1504848
Genome browser
AA seq
1413 aa
AA seq
DB search
MKALLDLFKQVQQEEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIEPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRAINIDEQVEQLRTELKNTGSEAKIKKFAKRLKVLEAFQRSGIKPEWMILE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAINGKGEGLTFTGVSEVLRAYENK
EVELASRVNVRITEMVRNEDTSEGAPEFVPKVTLYATTVGRAILSEILPHGLPFSVLNKP
LKKKEISRLINTAFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKETIVG
DAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSEAVGKAMMEQLSTEPVTDRDGNETR
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEAL
RDRILGRVAVADVVNPETQETLYEAGTLLDEVAVEEIERLGIDEVRVRTPLTCETRYGLC
ASCYGRDLGRGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSN
GIVRFTATMRYVTNAKGEQIVISRSGEALITDDFGRERERHKVPYGATLLQLDGATIKAG
TQLATWDPMTRPIITEYGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQASKS
VRPQVKLLDANGEEVKIPGTEHAVQIGFQVGALITVKDGQQVQVGEVLARIPTEAQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDLEGNQHEFLIAKEK
QVLVHDAQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQITDNGDTRFIPGEQVERSDMLDENDRMIAEGKRPASYDNVLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKAKES
SDRERFDQIAAEEAFDFGTPSTPAEEPQHPAAE
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctgctcgatctattcaagcaagtccaacaggaagaagttttcgacgcgatc
aagatcggtctggcctcgcccgacaagatccgttcgtggtcgttcggcgaagtgaagaag
ccggagaccatcaactaccgtacgttcaagccggaacgcgatggtctgttctgcgcgaag
atcttcgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcat
cgtggcgtgatctgcgagaagtgcggcgtcgaagtgacgctggcgaaggtgcgtcgtgag
cggatgggccacatcgagctggcctcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaggcgtacgtggtgatcgaaccgggcatgacgccgctgaaggcgcggcagatcatg
accgaagaggattactacaacaaggtcgaggaatacggcgacgaattccgtgccgagatg
ggcgcggaaggcgtgcgcgagctgctgcgcgcgatcaacatcgacgagcaggtcgaacag
ctgcgcaccgagctgaagaacaccggctcggaagcgaagatcaagaagttcgcgaagcgc
ctgaaggtgctcgaggccttccagcgttcgggcatcaagcccgagtggatgatcctcgag
gtgctgccggtgctgccgccggaactgcgtccgctcgtgccgctggacggcggccgtttc
gcgacgtcggacctgaacgacctgtatcgccgcgtgatcaaccgtaacaaccggttgaag
cgtctgctcgagctgaaggcgcctgaaatcatcgtccgcaatgaaaagcggatgctgcag
gaagccgtcgactcgctgctcgacaacggtcgtcgcggcaaggcgatgacgggcgccaac
aagcgtccgctgaagtcgctcgccgacatgatcaagggcaagggcggtcgtttccgtcag
aacctgctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccgacg
ctgaagctgcaccagtgcggcctgccgaagctgatggcgctcgaactgttcaagccgttc
atcttcaacaagctggaagtgatgggcgttgcgacgaccatcaaggcggcgaagaaggaa
gtcgagaaccagacgccggtcgtgtgggacatcctcgaagaggtgatccgcgagcacccg
gtgatgctgaaccgtgcgccgacgctgcaccgtctcggtatccaggcgttcgagccggtg
ctgatcgaaggcaaggcaatccagctgcacccgctcgtctgcgcggcgttcaacgccgac
ttcgacggtgaccagatggccgttcacgtgccgctgtcgctcgaagcgcagatggaagcg
cgcacgctgatgctcgcgtcgaacaacgtgctgttcccggccaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctgggtctgtactacgcgacccgcgaggcgatcaacggc
aagggcgaaggcctgacgttcacgggcgtgtcggaagtgctgcgcgcgtacgagaacaag
gaagtcgagctcgcgtcgcgcgtcaacgtgcggatcaccgaaatggtccgcaacgaggac
acctcggaaggcgcgccggaattcgtgccgaaggtcacgctgtacgcgacgaccgtcggc
cgcgcgatcctgtcggagatcctgccgcacggcctgccgttctcggtgctgaacaagccg
ctgaagaagaaggaaatctcgcgcctgatcaacacggcgttccgcaagtgcggtctgcgc
gcgacggtggtgttcgccgatcagctgatgcagtcgggtttccgtctcgcgacgcgcgcc
ggcatctcgatctgcgtggacgacatgctcgtgccgccgcagaaggaaacgatcgtcggc
gacgccgcgaagaaggtgaaggagtacgaccgccagtacatgtcgggtctcgtcaccgcg
caggaacgctacaacaacgtggtcgacatctggtcggcgacgtcggaagcggtcggcaag
gcgatgatggagcagctgtcgacggagccggtgacggaccgcgacggcaacgagacgcgc
caggagtcgttcaactcgatctacatgatggccgactcgggcgcccggggttcggcggtg
cagattcgtcagctggccggtatgcgcggcctgatggcgaagccggacggctccattatc
gagacgccgattaccgcgaacttccgcgaaggcctgaacgtgctgcagtacttcatctcg
acccacggtgcacgtaagggtctggctgatacggcactgaagaccgcgaactcgggttac
ctgacgcgtcgtctggtcgacgtcacgcaggatctggtggtggtcgaggacgattgcggc
acgtcgaacggcgtcgcgatgaaggcgctggtcgaaggcggtgaagtcgtcgaagcgctg
cgcgaccgtatcctcggccgcgtcgcggtcgcggacgtcgtcaacccggaaacgcaggaa
acgctgtacgaagcgggcacgctgctcgacgaagtggcggtcgaggaaatcgaacgcctc
ggcatcgacgaagtgcgcgtgcgcacgccgctgacctgcgaaacgcgttacggcctgtgc
gcatcgtgctacggccgcgacctcggccgcggctcgctggtgaacgtcggcgaagcggtc
ggcgtgatcgcggcgcagtcgatcggcgaaccgggcacgcagctgacgatgcgtacgttc
cacatcggtggtgcggcatcgcgtgcggcagtggcctcgtcggtcgaagcgaagagcaac
ggtatcgtgcgtttcacggcgacgatgcgctacgtcaccaacgcgaagggcgagcagatc
gtcatctcgcgttcgggcgaggcgctgatcaccgacgacttcggtcgcgagcgcgagcgt
cacaaagtgccgtacggcgcgacgctgctgcagctcgacggtgcgacgatcaaggctggt
acgcagctcgccacgtgggatccgatgacgcgtccgatcatcaccgagtacggcggtacg
gtgaagttcgagaacgtcgaggaaggcgtgacggtcgcgaagcagatcgacgacgtgacc
ggtctgtcgaccctggtcgtgatcgacgtgaagcgtcgcggttcgcaggcatcgaagagc
gtgcgtccgcaggtcaagctgctcgacgcgaacggcgaggaagtgaagatcccgggcacc
gagcacgcggtgcagatcggcttccaggtcggcgcgctgatcaccgtgaaggacggtcag
caggtgcaggtgggtgaagtgctcgcacgtatcccgaccgaagcgcagaagacgcgtgac
attaccggcggtctgccgcgggtggcggaactgttcgaagcgcgttcgccgaaggatgcg
ggcattctcgcggaagtcaccggcacgacgtcgttcggcaaggacacgaagggcaagcag
cgtctcgtcatcacggacctcgaaggcaaccagcacgagttcctgatcgcgaaggaaaag
caggtgctggtccacgacgcccaggtcgtcaacaagggcgaaatgatcgtggacggcccg
gccgatccgcacgacatcctgcgtctgcagggtatcgaggcgctgtcgcgctacatcgtc
gacgaagtgcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgag
gtgatcgttcgccagatgctgcgtcgtgtgcagatcaccgacaacggcgatacgcgcttc
atcccgggcgaacaggtcgagcgttccgacatgctggacgagaacgatcgcatgatcgcc
gagggcaagcgtccggcttcgtacgacaacgtgctgctcggtattacgaaggcgtcgctg
tcgaccgactcgttcatctccgcggcatcgttccaggaaacgacccgcgtgctgaccgaa
gcggcgatcatgggcaagcgcgacgatctgcgcggcctgaaggaaaacgtgatcgtcggc
cgtctgatcccggccggtaccggtctcgcgttccacaaggcgcgcaaggcgaaggaatcg
tcggatcgcgagcgtttcgaccagatcgcagcggaagaagcgttcgacttcggtacgccg
agcacgccggccgaagaaccgcagcacccggcagccgagtaa
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integrated database retrieval system
