Burkholderia pseudomultivorans: WS57_25090
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Entry
WS57_25090 CDS
T04870
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bpsl
Burkholderia pseudomultivorans
Pathway
bpsl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bpsl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WS57_25090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpsl03021
]
WS57_25090
Transcription machinery [BR:
bpsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WS57_25090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_20
HTH_23
HTH_24
GerE
HTH_28
HTH_11
HTH_IclR
Xre-like-HTH
HTH_38
PhyR_sigma-like
TnsD
HTH_40
HTH_29
MarR_2
HTH_3
Trp_repressor
MarR
HTH_Crp_2
HTH_7
HTH_10
HTH_5
HVO_A0261_N
LacI
HTH_Tnp_ISL3
HTH_17
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AOI91994
LinkDB
All DBs
Position
1:2779746..2780255
Genome browser
AA seq
169 aa
AA seq
DB search
MSADKLSLHREIDVLYAGHHAWLRGWLSRKLGCAHRAADLAHDTFMRLLARDEPIAADEP
RAFLTTVAQRVLFNHWRREQLERAYLDALAQRAEAVAPSPEERAVLLETLLEIDRLLDGL
PVAAKRAFLLAQLDGLTQAEIARELGVSLATVKRHLVKAGAQCFFAMAA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgacaagctgtccctccatcgagaaatcgacgttctgtacgccggccatcat
gcgtggctgcgcggctggctgagccgcaagctcggctgcgcgcatcgcgcggccgatctc
gcgcacgacacgttcatgcggctgctcgcgcgcgacgagccgatcgccgccgacgagccg
cgcgcgttcctgaccacggtcgcgcagcgcgtgctgttcaaccactggcggcgcgagcag
ctcgaacgcgcgtatctcgatgcgcttgcccagcgtgccgaagcggttgcgccgtcgccg
gaggagcgggccgtgctgctcgagacgctgctcgagatcgaccggctgctcgacggcctg
ccggtcgccgcgaagcgcgcgttcctgctcgcacagctcgacgggctcacgcaggccgag
atcgcgcgcgaactcggcgtgtcgctcgcgacggtcaagcgtcatctggtgaaggccggc
gcgcagtgtttcttcgcgatggcggcctga
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