Burkholderia pseudomultivorans: WS57_30440
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Entry
WS57_30440 CDS
T04870
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bpsl
Burkholderia pseudomultivorans
Pathway
bpsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WS57_30440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpsl03019
]
WS57_30440
Enzymes [BR:
bpsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WS57_30440
Messenger RNA biogenesis [BR:
bpsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WS57_30440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
AOI92958
UniProt:
A0A132ERU6
LinkDB
All DBs
Position
1:complement(3933478..3934929)
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AA seq
483 aa
AA seq
DB search
MSDSVAKPVDATFDQFGLAADILKAIAEQGYTTPTPIQAQAIPVVLAGRDVMGAAQTGTG
KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTSLRSAV
VFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLP
DLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTNANVTQIVYDVA
EGDKQAAVVQLLRDRGLKQVIVFCNSKIGASRLARNLERDGVVASAIHGDKSQIERMQAL
DAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGATGDALSL
CSPNERKQLADIEKLIKRPLEVQTLALDKPARHRHDERGGERGGRRDRDEHRGASARRSS
GTERGHHRRHEAPVDDFFLKPYEPSASTKQPEETKAAQPEKKGPKRQVAALLGGFGMPRK
PSA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctgtcgccaagcctgtcgacgcaaccttcgatcaattcggccttgccgcc
gacatcctgaaagccattgcggagcagggttatacgacgccgacgccgatccaggcgcag
gccattccggtcgtgctcgccggccgcgacgtcatgggcgccgcgcaaacgggcaccggc
aagaccgcgagcttctcgctgccgatcatccagcgcctgctgccgcaggccaacaccagc
gcctcgcccgcgcgccatccggtgcgcgcgctgatcctcacgccgacgcgcgaactggcc
gaccaggtcgccgcgaacgtgcacgcgtatgcgaagcacacttcgctgcgcagcgcggtc
gtgttcggcggcgtcgacatgaatccgcagatggccgagctgcgccgcggcgtcgagatc
ctgatcgcgacgccgggccgcctgctcgaccacgtgcagcagaagacggcgaatctcggc
caggtgcagatcctcgtgctggacgaagccgaccggatgctcgacatgggcttcctgccc
gatctgcagcgcatcctgaacctgctgccgaaggagcgccagacgctgctgttctcggcg
accttctcgccggaaatcaagaagctcgcgtcgacctacctgcgcaatccgcagacgatc
gaggtcgcacgcagcaactcgaccaacgcgaacgtcacgcagatcgtctacgacgtcgcg
gagggcgacaagcaggcagccgtcgtgcagttgctgcgcgatcgcggcctgaagcaggtg
atcgtgttctgcaacagcaagatcggcgcgagccggctcgcgcgcaatctcgagcgcgac
ggcgtggtggcatcggcgatccacggcgacaagtcgcagatcgagcggatgcaggcgctc
gacgcgttcaagcgcggcgagatcgaggcgctggtcgcgaccgacgtggccgcgcgcggc
ctcgacatcgccgaactaccggccgtgatcaacttcgacctgccgttcaacgcggaagac
tacgtgcaccggatcggccgcacgggtcgtgcgggcgcgaccggcgatgcgctgtcgctg
tgcagcccgaacgagcgcaagcagctcgcggatatcgaaaagctgatcaagcgtccgctc
gaggtgcagacgctcgcgctcgacaagccggcgcgtcatcgtcacgacgagcgcggcggc
gaacgcggtggacgacgcgatcgcgacgagcatcgcggcgcgtcggcacgccgctcgtcg
gggacggaacgcggccatcatcgccgccacgaggcgccggtcgacgatttcttcctgaag
ccgtacgagccgtcggcgtcgacgaagcagcccgaggagacgaaggccgcgcagcccgaa
aagaaggggccgaagcgtcaggtcgccgcgctgctcggcgggttcggcatgccgcgcaag
ccgtcggcctga
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