Burkholderia pseudomultivorans: WS57_32140
Help
Entry
WS57_32140 CDS
T04870
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bpsl
Burkholderia pseudomultivorans
Pathway
bpsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WS57_32140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpsl03019
]
WS57_32140
Enzymes [BR:
bpsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WS57_32140
Messenger RNA biogenesis [BR:
bpsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WS57_32140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
Sacchrp_dh_NADP
Ric8
MerR-DNA-bind
DegT_DnrJ_EryC1
Cas3-like_C_2
CARD_2
Motif
Other DBs
NCBI-ProteinID:
AOI93270
LinkDB
All DBs
Position
1:4303816..4305249
Genome browser
AA seq
477 aa
AA seq
DB search
MSFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHTFYADHRGAKRAVRALILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEADRMLDMGFIHDIKRVLAKLPP
RRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAESVAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALSEFKSSTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRD
IERLIKREIPQEVIAGFEPDPNAKPEPIQQRRGQQPRGGGGGGGNRAPRAGGSAQPAAKR
DGSPQPKAAKPRASGGNGGNGNNGGRPAAGGNGARAANGNAAHPNRNRSSRSGQRGH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgaatctctcggcctggccgaaccgctggtcaaggcggtcaacgagctcggc
tacacgtcgccgactccgatccagcagcaggcaattcccgccgtcctcggcggcggcgac
ctgctcgccggcgcgcaaaccggcaccggcaagaccgccggcttcacgctaccgatcctg
cagcgcctgcacacgttctacgccgaccaccgcggcgcgaagcgcgcggtgcgcgcgctg
atcctcacgccgacgcgcgaactggccgcacaggtcgaggaaagcgtgcgcgcgtacagc
aaatacctgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatccgcagatc
gatgcgctcaagcgcggcgtcgacatcgtcgtcgcgacgccgggccgcctgctcgaccac
atgcagcagaagacgatcgacctgtcggatctcgacatcctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcatccacgacatcaagcgcgtgctggcgaagctgccgccg
cgccgccagaacctgctgttctcggcgaccttctccgacgagatcaaggcgctcgccgac
agcctgctcgactcgccggcgctgatcgaggtcgcgcgccgcaacacgaccgccgagagc
gtcgcgcagaagatccatccggtcgatcgcgatcgcaagcgcgagctgctcacgcacctg
atccgcgaacacaactggttccaggtgctcgtgttcacgcgcaccaagcacggcgcgaac
cggctcgccgagcagctgaccaaggacggcatcagcgcgatggcgatccacggcaacaag
agccagtcggcgcgcacgcgcgcgctgtcggagttcaagagcagcacgctgcaggtgctc
gtcgcgaccgatatcgccgcgcgcgggatcgacatcgaccagttgccgcacgtcgtcaac
ttcgacctgccgaacgtgccggaagactacgtgcaccggatcggccgcacgggccgcgcg
ggcgcgaccggcgaagccgtgtcgctcgtgtgcgtcgacgaaaagcagctgctgcgcgac
atcgagcggctgatcaagcgcgagattccgcaggaagtgatcgcgggcttcgagcccgat
ccgaatgcgaagccggaaccgatccagcagcgtcgcggccagcagccgcgcggcggtggt
ggcggcggcggcaatcgcgcgccgcgcgccggcggctcagcgcagccggccgcgaagcgc
gacggcagcccgcagccgaaggcagcgaagccgcgtgcatccggcggcaatggcggcaac
ggcaacaatggcggccggcccgcggccggcggcaacggcgcacgcgcggcgaacggcaac
gccgcgcacccgaaccgcaaccgttcgtcgcgcagcggccagcgcggtcactga
DBGET
integrated database retrieval system
