Burkholderia pseudomallei MSHR511: BBQ_1537
Help
Entry
BBQ_1537 CDS
T03012
Name
(GenBank) bacterial Ig-like domain family protein
Organism
bpsm
Burkholderia pseudomallei MSHR511
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
FG-GAP
HemolysinCabind
Big_3_5
FG-GAP_3
Big_3_2
Motif
Other DBs
NCBI-ProteinID:
AHG34163
LinkDB
All DBs
Position
1:1729345..1738005
Genome browser
AA seq
2886 aa
AA seq
DB search
MDSGDEIVFSSLPANSELKRDGADLVVRTPDETFVLKDAAAKLADESVVVRLGEQPLVVT
QAPNENTHLPAGVQLAGLAAPGQNSAFGLQSFVSAAGEQSLQSDTVSPVAMGAVTTSGIK
DAGLSDGGLMGNLRTDVRPTDEIPMYQQKLTQLPLDPRIDVPSRTDFGVNAARYEPAPAA
VTAPNFVMSPGDKDPGAGVLQNVTNPQLDGSGPANAVVTAYEVASDGHLISLGTATSDGT
GNFAITPNTPLADGTHDIVFQAQKGDLTSPFSAPTSVVIDTKINTPTIGLPASSDSFGAG
TVGTNHDDITNVTNPTLTGTAEAGATVYVSDGSGHTVSTIADSNGNYSVQAPGTLAEGNN
VFTVQAVDKAGNTSGTAQQNVTLDTVAATLPAPQLDHGSDTGASNSDGITRATQPVLTGG
GAEPNALVTVYADGVSIGQATADSLGHYTIHSGVMADGTHQITARQIDIAGNTSALSGAA
LVTIDTSEPAPANLKLVDDTFGLHTAGTPSDGLTKDSRVTISGTASAGDVVTLMDGATSV
GQVTADASGNWTIQTASLADGTHSLTASAVDLAGNTSPASSTLPVTVDTINPPPALTLSP
LSDTFGSGTSGTNHDNITSATLPTFNGTAAAGSYVQLYDVTGGTTVSVGSAVADSSGGWT
TTLTSPLSGSASGVSHTLVAVGVDPAGNTSTVSGPDVVVIDNAAAVLPGPTMASASDTGA
SSSDGITSNTAPVFTGTGAEAGALVTIYANGTSVGHATADASGNYTIQSNALGADGRYQI
TAQQVDIAGNTSPSSSVTAMTLDTSEPAPVNLHLVDDTFGQGTAGTSSDNLTKDSRVTIS
GTASAGDVVTLMDGATSVGQVTADASGNWTIQTASLADGTHSLTASAVDLAGNTSPASST
LPVRVDTTTTLPSLTLSSSSDTFGAGTSGTNHDNITSATQPTINGTAEAGSYVQLYDVTG
GTTVSVGEAVAGSNGTWTTQLVSPLSGSASGVSHTLVAVGVDPAGNTSAVSGPDVLVIDT
STPSPSTPALTPADQFNGNPSTTLNARPTLTGTAEAGASVSLTDSGVVVGVGVADSTGHW
TIQTSALFAGGHTITATAVDIAGNSNVSGSSTIAVAANVPTPPAPVLITPDDTSPIDSTN
NDDLTRVTMPHFTGTTNQGYLVTLFVDGVSVGQGVAGGNGSWTIQDGTSLADGAHQVTVR
VSDPLTGATSAMGPGTTVTIDTTPPAAPVVQLASYSDSFGGGTTGTNSDHLTNVTQPVLT
GTADPNTVELLLEGTVTLGTATTNASGAWSFTIQNPLADGTHTFAVTSYDQANNHSAATN
LVVTVDTVAPAGTTPTLDPTSDSFSPINGIGNNHDNITNNLSPFFTGVNQVAGGEVLLYD
NGQLIGSATSLGAVGTTWTVSPGNLYPGTHFIQSRYIDPAGNTGALSSGVSVTIDNSEPA
PTNLNLPASADSGQSNTDHITNVTMPPITGNANYQDVVVLTAVNGTTTTTVGTATVGASG
SWSIVPGSLADGTYTFSAVAVDVAGNTSNPGVPVQVVVDTHAAAPSITLGTPYDTFGTGT
SGTNSDELTRNTIPYMYGVAEPGARVTVVENGNTIGTVNADSSTGSYSIQIPPATVDGTY
TFQAMQVDVAGNTSAYSAPNYVTIDTVAATPTLTVLTPASDTFGVGTAGNNHDNLTNAST
IGIMGTAAEAGAALDLYQITVSGSITTSTSVAHTTAGAGGSYTFASFTAPGADGVYTYET
REIDPAGNTSPMSPAFNVTIDRTVVAPVLTLQNDTQYSGSPNWSTGTNSGGAGSANFGTT
TDGLTKATQPIVSGTVENGSLVVVYRDGVSIGQATANSAGAWSFTDPVSQADGTHAYAAY
QVDRAGNTSGLGANLAVTVDTQIETARYLPAPTPAGASSNYYAQIGIPALANGLNAQEIY
NVDAAGHTGVPVYFQIDPATAAKGKAGDIVVVDFTFTYANGTGTATVTTEASYTIQAQDL
VVTAGNTPTLTTWVTPNTFFAGNNWLSNYTGVNQMTVQLQVRDQAGNVGFTNTPNVDTIN
GAMNASHVNIDLWTLATNTGTNTWLGNGVQVYRELGRPADQLGWQVIVGDDFNNDGIHDL
FMYAPTGGAANNNGRMYLVAGQADTVANGTGFVDLQNVGTTSDWSENHGQGAATGGYVWT
GVGNQSYTNWTSVADITGDGRGELAFDQTVGTFSQGNPEIVANILYSDAVGPGGFQQALT
GLTRPEMTQFYVPVHGDSAYTSRGVSSNFAAEFGALATHYDFNGDGRGDLLWADGGTGNM
GNSTTVYGSVLVGFTPSSAVGLYDLRLPGSSMNQTASKGFDVYSTDPLHPVGANSALTQA
PNNIWAQPIGDLTGDGLNDIIVGQPNGTFNNLATNGRVAVIFGRNDGQGVDINNLSAGQG
FYITWNSAVNAGDVFGQQIKVMDLNSDGYDDVAISIRCSAAPNTSSNDSFDFVIDGKWLA
NYVHTNLAAGGAVPTLSIDAIYNAMVNHTATPMGWIDGDPTNTNFAGNTSYPLNVGTPVL
KADLNGDGYQDTVIRNGTQYYVLWGSPDYHAGTDTNYGTTFFNQPNHLSLLNNNVGGAPV
QFADINGDGLWDMMISQPGNATDGTNGGLVEVVYGVNSQSGSAPGSPLPFASSYTNSWTA
GADTVTGSSGRDMLNGGAGNDTIVGNGGVDVLEGGGGNDMLVVNGDNIAHFTTPGSYWDG
GIMMGGEINTLQFDANNTANATLDLTQVSVGNNLSAHLHNIERFDLNGNGNMLKFDLRSV
LDTSAMGVFLDGGSSGETWSGSTWDPGYTGSHGNRTTPLGPNVPMKQWVIDGNATNTLDF
EPFTQMAQTGASTGLTGNWALVGHVTHNDVHGVSQNYDIYEFSGQNAQIIVNHNIHLTHA
GSGTTL
NT seq
8661 nt
NT seq
+upstream
nt +downstream
nt
gtggatagcggcgatgagatcgtgttttccagcttgccggccaattcggagttgaagcgc
gacggcgcggatcttgtggtgcgcacgcccgacgagacgttcgtgctcaaggatgcggcg
gcgaagctggccgatgagagcgtggtggtgcgattgggcgaacagccgcttgtcgtcacg
caggcacccaatgaaaacactcatttgccggcgggcgtccaattggcaggcttggccgcg
cccggccagaacagtgcgttcgggctgcaatcgttcgtgagcgccgccggcgagcagtca
ctgcagagcgatacggtgtcaccggtcgccatgggcgcggtgacgacatcgggcatcaag
gacgcgggcctgagcgacggcgggctaatgggcaacctgcgaacggacgtgcggccgacg
gacgagatacccatgtatcagcagaagctgacgcagttgccgctcgatccgcgtatcgat
gtgccgagccgcaccgacttcggcgtcaacgccgcgcgctatgagccggcaccggcggcg
gtgactgcgccgaatttcgtcatgtcgccgggggacaaggatccgggcgcgggcgtgttg
cagaatgtcacgaatccgcaacttgacggcagcggtccggccaacgcggtcgtgaccgcg
tacgaggttgcgtcggatggccatttgatctcgctcggcaccgcgacctcggacggtacg
gggaattttgcgatcacgcctaatacgccgctggcggacggtacgcacgacatcgtgttc
caggcgcaaaaaggcgacctgacgagcccgttttccgcgccgaccagcgtcgtgatcgac
acgaagatcaacacgccgacgatcggtcttcccgcgtcgtcggacagcttcggcgccggc
acggtcggcacgaaccatgacgacatcaccaatgtcacgaacccgacgttgacgggcacg
gccgaagcgggagcgacggtatatgtgtccgacgggagcggccataccgtctcgacgatt
gccgacagtaacggcaactattcggttcaggcgccgggcacgctcgccgaaggcaacaac
gtcttcaccgtgcaggcggtggacaaggccggcaatacgagcggcaccgcacagcagaac
gtgacgctcgacactgtggccgcgactctgccggcaccgcagttggaccacggctcggat
accggcgcgtccaatagtgacggcatcacgcgcgccacccagccggtgttgacgggcggc
ggcgcggaaccgaatgcattggtgacggtatacgccgacggggtgtccatcggtcaggcg
acggcggactcgctcggccattacacgatccactccggggtaatggccgatggcacgcac
cagatcacggctcgccagatcgacatcgccggcaacacgtcggcgttgagtggcgcggcg
ctcgtaacgatcgacacgagcgagccggcgccggcgaacctgaaactggtggacgatacg
ttcggtctgcatacagccggtacgccgagcgacggcctgaccaaggacagccgggtcacg
atcagcgggacggcgagcgcgggcgacgtggtgacgctgatggacggcgcgacgtcggtg
gggcaggtcacggccgacgcaagcggcaactggacgatccagaccgcgtcgcttgccgac
ggcacgcatagcctgacggcgagcgcggtcgatctggcgggcaacacgagcccggcgtcg
agcacgctgccggtgaccgtggatacgatcaacccgccgccagcgctgacgctgtcgccg
ttgtcggacacgttcggctcgggcacatcgggcacgaaccatgacaacatcacgtcggcg
acgctgccgacgttcaacggcacggcggcagcgggctcgtacgtgcagttgtatgacgtg
acgggcggcactaccgtgtcggtgggttcggcggtggcggacagcagcggcggttggacg
acgacgttgacgagcccgctgtcgggttcggcgagcggcgtatcgcacacgttggtggcg
gtgggggtggaccccgcgggcaatacctcgacggtatccggtccggacgtggtggtgatc
gacaatgcggcggccgtgctgcccggcccgacgatggcatccgcatcggatacgggcgcg
tccagcagcgacggcatcaccagcaacacggccccggtgtttacgggcacgggcgcggaa
gcgggcgcgctggtgacgatctatgcgaatggcacatcggtgggccatgcgacggccgac
gccagcgggaactatacgattcagtccaacgcgctcggcgcggacggacggtatcagatc
acggcgcagcaggtcgatatcgcgggcaatacgtcgccctcgagcagcgtgactgcgatg
acgctggatacgagcgaaccggcgcccgtcaatctgcatctggtggacgacacgttcggc
cagggcacggccgggacatccagcgacaatctgaccaaggacagccgggtcacgatcagc
gggacggcgagcgcgggtgacgtggtgacgctgatggacggcgcgacgtcggtggggcag
gtcacggccgacgcaagcggcaactggacgatccagaccgcgtcgcttgccgacggcacg
catagcctgacggcgagcgcggtcgatctggcaggcaacacgagcccggcgtcgagcacg
ctgccggtgcgggtcgacactacgacgacgctcccttcgctgacgctgtcatcgtcgtcc
gatacgttcggcgccggcacgtccggcacaaaccatgacaacatcacgtcggcgacgcag
cccaccatcaacggcacggcagaggcgggctcgtacgtgcagctgtatgacgtgacgggc
ggcacgaccgtgtcggtgggtgaagcggtggccggcagcaatggcacgtggacgacgcaa
ctggtgagcccgctgtcgggttcggcgagcggtgtgtcgcacacgctggtggcggtgggg
gtggaccccgcggggaacacctcggcggtatccggtccggatgtgcttgtgatcgacacg
tcgacgccatcgccgagcacgccggcgttgacgcctgctgaccagttcaacggcaatccg
tcgacgacgctcaatgccagaccgacgctgactggcacggcagaggcaggcgcgagtgtc
agcctgaccgatagcggcgtggtggtgggggtcggcgtagcggattcgaccggccattgg
acgatccagacgagtgcgctgtttgcgggcgggcacaccatcacggccacagccgtcgat
atcgccgggaacagcaacgtctcgggttcgagcacgatcgcggtggctgcgaacgtcccg
acgccgcctgcgccggtgctgatcacgccggatgatacgtcgccgatcgacagcaccaac
aacgacgatctgacgcgcgtcaccatgccgcatttcacgggcacgacgaatcagggctat
ttagtgaccctgttcgtcgacggcgtgtccgtcgggcagggcgtagccggtggcaacgga
agctggacgatccaggacggcacgtcgctggctgacggcgcgcaccaggtgacggtgcgc
gtcagtgatccgttgacgggcgcgacaagcgcgatgggccctgggacgacggtgacgatc
gacaccacgccgccggctgcgcccgtcgtgcagctcgcttcgtattcggacagcttcggt
ggcgggacgaccggcaccaacagcgaccacctgaccaacgtcacgcagccggtgctgacc
ggcacggccgacccaaacaccgtcgaattgctgctagaagggaccgtgacccttggcacg
gcgaccacgaatgcgtcgggtgcatggagcttcacgatccagaatccgctcgcggacggc
acgcatacgttcgcggtcacgtcctacgaccaggccaacaaccattccgccgccaccaac
ctcgtcgtgacggtggacaccgtggcgcccgcggggacgacgccgaccctggacccgacg
tccgattcgttctcgccgatcaacggcatcggcaataaccacgacaacatcaccaacaat
ctgtcgccgttcttcaccggggtgaatcaggtcgcgggcggcgaggtgctgctctatgac
aacgggcaactgatcggatcggccacgtcgctgggtgcggtgggaacgacctggacggtc
agtcccggcaacctgtatccgggaacgcacttcatccagtcgcgctatatcgaccccgcc
ggcaataccggagcgttgtcgtcgggcgtgagcgtgaccatcgacaacagcgagcccgcg
ccgaccaatctgaacctgccggcgtcggcggactcggggcaaagcaataccgaccacatc
accaatgtgaccatgccgcccatcacggggaacgccaattaccaggatgtggtggttctg
acggccgtcaacggcacgaccaccacgacggtaggcaccgcgacggtcggcgcgtcggga
agctggtcgatcgtgccgggctcgctcgcggacggcacgtatacgttctcggcggtggcc
gtggacgtggcaggcaataccagcaacccgggcgtgccggtccaggtggtggtcgatacg
cacgcggcggcgccgtcgatcacgctgggtacgccgtacgatacgttcggcacgggcacg
agcggcaccaactcggatgagttgaccaggaacaccatcccatacatgtacggcgtcgca
gaaccgggcgcgcgcgtgaccgtcgtcgagaatggcaacaccatcggcacggtcaacgcg
gactcgagcacgggttcgtattcgatccagataccgccggcgacggtggacggcacctat
acgttccaggcgatgcaggtcgacgtggcgggcaatacctcggcgtatagcgcgccgaac
tacgtgaccatcgataccgtggcggcgacgccgacgctgaccgtgctcacgcccgcatcg
gatacgttcggcgtgggcacggcgggcaataaccacgataacctgaccaacgcgtcgacc
atcggcatcatgggtacggccgcggaagccggtgcggcgcttgatctataccagatcacg
gtgtcgggctccatcacgacgtcgacgtcggtcgcgcataccacggcgggcgcgggcggc
tcgtataccttcgcgtcgttcacggcacctggggccgacggcgtctatacgtatgagacc
cgggaaatcgatcctgccggaaacacgtcgccgatgtcgccggcatttaacgtcacgatc
gaccgcacggtcgtggccccggtcctcacgctgcagaacgacacgcaatattcgggcagc
ccgaactggagcaccggcaccaatagcggcggtgcaggttcggccaacttcggcacgacc
acggacgggctgacgaaagcgacgcaaccgatcgtgtccggaaccgtggaaaacggctcg
ctcgtcgtcgtctatcgcgacggcgtgtcgatcggacaggcgacggccaacagcgcgggc
gcgtggtcctttacggatccggtttcgcaggctgacggcacgcacgcgtatgcggcatat
caggtcgaccgggccggcaatacgtcaggcctcggcgccaaccttgcggtgaccgtcgat
acgcagatcgaaaccgcgcgctacctgcctgccccgacgccggcgggcgcgagttcgaac
tactacgcgcagatcggcattccggcgctggcgaacggcctgaacgcgcaggagatctac
aacgtggatgcggcgggccacacgggcgtgccggtgtacttccagatcgatccggccacg
gccgccaaaggcaaggccggcgatatcgtggtggtggacttcacgttcacgtatgccaac
ggcacgggcaccgcgaccgtaacgacggaagcgtcctacacgattcaggcgcaggatctg
gtggtcacggccggcaacacgccgacgctgacgacgtgggtcacgcccaacacgttcttc
gccggcaacaactggttgagcaactacaccggcgtcaatcagatgacggtgcaactgcag
gtgcgcgatcaggccggcaatgtcggcttcaccaacacgccgaacgtcgacacgatcaac
ggcgcgatgaacgcctcgcacgtgaacatcgacctgtggacgctggcgaccaacaccggc
accaatacgtggctcggcaacggcgtgcaggtctaccgcgaactcggacgcccggctgat
cagctgggctggcaggtcatcgtcggcgacgatttcaacaacgacgggatccacgacctg
ttcatgtacgcgccgacgggcggcgccgccaacaacaacggccggatgtatctggtggcc
ggccaggcggacaccgttgcgaacggcacggggttcgtggatctgcagaacgtcggaacc
acgtccgactggagcgagaaccacggtcaaggcgctgccaccggcggctatgtctggacc
ggcgtgggcaatcagagttacacgaactggacttccgttgcggacatcacgggagacggc
cgcggcgaactggcgttcgatcagaccgtggggacgttttcgcaaggtaatccggagatc
gttgcgaacattctgtacagcgatgcggtcggcccgggcggcttccagcaagcgctgacg
gggctgacgcggcccgagatgacgcagttctacgttccggttcacggcgattcagcctat
accagccgaggggtgtcgtcgaacttcgccgccgagttcggcgcgcttgcgacgcattac
gacttcaacggcgacggccgtggagacctcctgtgggcggacggcggcacgggcaacatg
ggaaacagcacgaccgtatacggcagtgtcttggtgggcttcacgccgagttcggccgtg
gggctgtacgacttgaggctgcccggttcgtcgatgaaccagacggcgagcaagggtttc
gatgtctacagcactgacccgctgcacccggtgggggcgaattccgccctcacgcaggcg
cccaacaacatctgggcgcagccgatcggagatctgaccggcgacgggctgaacgacatc
atcgtgggccagccgaacggcacgttcaacaatctcgcgaccaacggccgcgtggcggtc
atcttcggccgcaacgacggccagggcgtcgacatcaacaatctctccgccggccagggc
ttctatatcacctggaacagcgcggtcaatgcgggcgacgtattcggtcagcagatcaag
gtgatggatctgaacagcgacggctacgacgacgttgcgatctcgatccgttgttccgcc
gcgccgaacacgagcagcaacgattcgttcgatttcgtgatcgacggcaagtggctggcg
aactacgtgcacaccaacctggccgcggggggcgccgtgccgacgctgagcatcgacgcg
atctacaacgcgatggtcaatcacacggccacgccgatgggctggatcgacggcgacccg
accaatacgaacttcgcgggcaataccagctatccgctcaacgtgggtacgccggtgctg
aaggcggacctgaacggcgatggctaccaggacaccgtgatccggaacggcacgcagtat
tacgtgttgtggggtagccccgactatcacgcaggaacggatacgaactacggcaccacg
ttcttcaatcagccgaatcacctgtcattgctgaacaacaacgtgggcggcgcgccggtc
cagttcgccgacatcaacggcgacggcctgtgggacatgatgatctcgcaaccaggtaac
gcgacggacggaacgaatggcggcctggtcgaagtggtgtatggcgtcaatagtcagtcg
ggctccgcgccaggctcgccgctgccgttcgcgtccagctacaccaatagctggacggcg
ggcgccgacacggtgacgggctcgagcggccgcgacatgctcaacgggggcgcaggcaac
gacacgattgtcggcaacggcggcgtggacgtgctcgagggcggcggcggcaacgacatg
ctcgtggtcaacggcgacaacatcgcgcacttcacgacgccgggttcgtactgggacggc
ggcatcatgatgggcggtgaaatcaacacgctgcagttcgacgccaacaacacggccaac
gcgacgctggatctcacgcaggtgagcgtgggcaacaacctgtcggcacaccttcacaat
atcgagcgcttcgatctgaacggcaacggcaacatgctcaaattcgatcttcgaagcgtt
ctggatacctcggcaatgggcgtattcctggacggcgggtcgagcggcgaaacctggtcg
ggttcgacctgggatccgggctatacgggctcgcacggcaaccgcacgacgccgttgggt
ccgaacgttccgatgaaacaatgggtgatcgacggcaatgcgaccaacacgctggatttc
gagccgttcactcaaatggctcaaaccggcgccagcacgggcctgaccggcaattgggcc
cttgtcgggcacgtgacgcacaacgacgtgcacggtgtctcgcagaactacgacatttac
gagttcagtggccagaacgcgcagatcatcgtgaaccacaacatccatctgacccacgca
ggttcgggcacgacgctgtaa
DBGET
integrated database retrieval system
