Burkholderia pseudomallei MSHR511: BBQ_240
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Entry
BBQ_240 CDS
T03012
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpsm
Burkholderia pseudomallei MSHR511
Pathway
bpsm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBQ_240 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpsm03400
]
BBQ_240 (ung)
Enzymes [BR:
bpsm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BBQ_240 (ung)
DNA repair and recombination proteins [BR:
bpsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBQ_240 (ung)
Prokaryotic type
BBQ_240 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHG33165
LinkDB
All DBs
Position
1:complement(246302..247090)
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AA seq
262 aa
AA seq
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MPQPSLFDDHTPPAPPAVQGGASALTLESQFDALPPDWRAIVEPFVASDAYAPLCRFVDG
ERAAGKAIYPADVFRALRLTHPDDVKVVILGQDPYHGEDRGIPQAHGLAFSVPPGVRPPP
SLRNIFKEISADFGYETPRHGCLDTWARQGVLLLNTVLTVERAAAASHAKRGWEKCTDTL
IHELATRHRHLVFMLWGAHAQAKRALFDAREHCVLEAPHPSPLSAHRGFLGCRHFALAND
YLVQHGRAPIDWRLPDEAETLA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaccctcgctgttcgacgatcacacgccgcccgcgccgcccgcagtgcaaggc
ggcgcatccgcgctcacgctggaatcgcaattcgatgcgctgccgcccgactggcgcgcg
atcgtcgagccgttcgtcgcgagcgacgcgtatgcgccgctctgccgcttcgtcgacggc
gagcgcgcggcgggcaaagcgatttatccggcggacgtattccgcgcactgcggctcacg
cacccggacgacgtgaaggtcgtgattctcggccaggacccctaccacggcgaggatcgc
ggcatcccgcaggcgcacgggctcgcgttctcggtaccacccggcgtgcggccgccgccg
tcgctgcgcaacatcttcaaggaaatctcggccgacttcggctacgagacgccccgccac
ggctgcctggacacatgggcgcgccagggcgtgctgctgctcaacacggtgttgacggtc
gagcgcgcggcggcggccagccatgcgaagcgcggctgggagaaatgcaccgacacgctg
atccacgaactcgcgacgcgccaccggcacctcgtgttcatgctatggggcgcgcacgcg
caggcgaaacgcgcgctgttcgacgcgcgtgagcattgcgtgctcgaagcgccgcatccg
tcgccgctgtccgcgcaccgcggctttctcggctgtcgtcatttcgcgctcgcgaacgac
tatctcgtgcagcacgggcgcgcgccgatcgactggcggctgcccgacgaggccgaaacg
cttgcctga
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