KEGG   Burkholderia pseudomallei MSHR511: BBQ_4021
Entry
BBQ_4021          CDS       T03012                                 
Symbol
clpV
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
bpsm  Burkholderia pseudomallei MSHR511
Pathway
bpsm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bpsm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BBQ_4021 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bpsm02044]
    BBQ_4021 (clpV)
Secretion system [BR:bpsm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BBQ_4021 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 nSTAND3 AAA_7 Sigma54_activat RuvB_N Zeta_toxin TniB AAA_24 AAA_18 AAA_14 AAA_25 NACHT AAA_33 Clp_N Hpr_kinase_C Rad17 T2SSE
Other DBs
NCBI-ProteinID: AHG37017
LinkDB
Position
2:578067..580745
AA seq 892 aa
MSDIGRVTLFGKLNTFLYETLEQATGFCRLRGNPYVELAHWLNQMLRRPDSDVHRILRRF
DIDAAAIDRGIVSALDRLPRGAGSVSDLSAHIDDAVERAWVYATLKYDAAQIRGAVLLLA
LVKTPQLRNVLYAIARDFERIVPDVLADELERIVAGSPEAPSPAARAAAGAIGDAGAAPS
AAREGSALARYAIDLTARARAGEIDPVVGRDGEIRQIVDILLRRRQNNPLLVGEAGVGKT
AVAEGFALRIVAGDVPPPLRDVELYLLDIGLLQAGASVKGEFESRLRGVIDEASSSERPV
ILFIDEVHTLVGAGGAAGTGDAANLLKPALARGLLRTIGATTWSEYKQYIEKDPALTRRF
QLVQVREPEEGAALAMLRGLAAKLEAHHRVLVLDDALQAAVTLSHRYIPARQLPDKAISL
LDTACARVAVSQHAVPAPIEDVRRRIDSLRVERELIARECALGAGDAQRLDAIDASIAGE
QTTLDALDARWQAERDALGKIVDWRASLLADDSSRVLDEAARADVQAKLSAALRALAELQ
GETPLVLPAVDTHAVAAVVSDWTGIPLGRMVRDEMQSVLKLAETLAERVVGQPHAVELIA
ERIQTARARLDDPAKPHGVFLLCGPSGVGKTETALALAETLYGGEHNAITINMSEFQEAH
TVSTLKGAPPGYVGYGQGGVLTEAVRRRPYSVVLLDEIEKAHRDVHEIFFQVFDKGWMED
GEGRYIDFRNTVILLTSNVGSERVMQLCRDPQRLPDAQTLTDALRAPLRAPLREVFPAAL
LGRLTVVPYYPLTDEMLARIVALQLARIERRIEAHHGIALRCADSATALIAERCRTIESG
GRMVDAILTHTVLPRISQEILRATIEGRALRAIDVSAEDGQFVYRFEEEGAT
NT seq 2679 nt   +upstreamnt  +downstreamnt
atgtccgatatcggccgagtgaccttgtttggaaaactgaacacttttctctacgagacc
ctggagcaggcgaccggcttttgccggctgcgcggcaatccctatgtcgagctcgcgcac
tggctgaaccagatgctccggcgcccggacagcgacgtgcaccggatcctgcgccgcttc
gacatcgacgcggcggcgatcgaccgcgggatcgtttcggcgctcgaccggctgccgcgc
ggcgcgggttccgtgtccgatctgtccgcgcacatcgatgatgcggtcgaacgcgcatgg
gtgtacgcgacgctcaagtacgacgcggcgcagattcgcggcgcggtgctgctgctcgcg
ctcgtgaagacgccgcagctgcgcaacgtgctgtacgcgatcgcgcgggacttcgagcgc
atcgtgcctgacgtgcttgccgacgagctcgaacggatcgtcgcaggctcgccggaggcg
ccgtcgcccgccgcgcgcgcggcggcgggggcgatcggcgacgcgggggcggcgccgtcc
gccgcgcgcgaaggctcggcgctcgcgcgctacgcgatcgatctgaccgcgcgtgcgcgc
gcgggcgagatcgatccggtggtcggccgcgacggcgagattcggcagatcgtcgacatc
ctgctgcgccgccggcagaacaatccgctgctcgtcggcgaggcgggcgtcggcaagacc
gcggtcgccgaaggcttcgcgctgcgcatcgtcgcgggcgacgtgccgccgccgctgcgc
gacgtcgaactgtatctgctcgacatcggcctgctgcaggcgggcgcgagcgtgaagggc
gaattcgagagccgcctgcgcggcgtgatcgacgaggcgagttcgagcgagcggcccgtc
attctgttcatcgacgaggtacacacgctcgtcggcgcgggcggcgcggcgggcacgggc
gacgcggcgaacctgttgaagcccgcgctcgcgcgcggcctgctgcgcacgatcggcgcg
acgacgtggtccgaatacaagcaatacatcgagaaggacccggcgctcacgcggcgcttc
cagctcgtgcaggtgcgcgagccggaggagggcgcggcgctggcgatgctgcgcgggctc
gccgcgaagctggaggcgcaccatcgcgtgctcgtgctcgacgatgcgctgcaggcggcc
gtcacgctgtcgcatcgctacattcccgcgcggcagttgccggacaaggcgatcagcctg
ctcgacaccgcgtgcgcgcgcgtcgcggtcagccagcacgcggtgcccgcgccgatcgag
gacgtgcggcggcggatcgacagcctgcgcgtcgagcgcgagctgatcgcgcgcgagtgc
gcgctcggcgcgggcgatgcgcaacggctcgatgcaatcgatgcatcgatcgccggcgaa
cagaccacgctcgatgcgctcgacgcgcgctggcaggcggagcgcgacgcgctcggcaag
atcgtcgactggcgggcctcgctgctggccgacgattcttcgcgcgtgctcgatgaggcg
gcgcgcgcggacgtgcaggcgaagctctcggccgcgctgcgcgcgctcgccgaattgcag
ggcgagacgccgctcgtgctgcccgcggtcgatacgcacgcggtggccgccgtggtgtcc
gactggaccggcatcccgctcgggcggatggtgcgcgacgagatgcaatcggtgctgaag
ctcgccgagacgctcgccgagcgcgtggtcggccagccgcacgcggtcgagctgatcgcc
gagcgcattcagaccgcgcgcgcgcggctcgacgatccggccaagccgcacggcgtgttc
ctgctgtgcgggccgtccggcgtcggcaagaccgagacggcgctcgcgctcgccgagacg
ctgtacggcggcgagcacaacgcgatcacgatcaacatgagcgagtttcaggaggcgcac
accgtatcgacgctcaagggcgcgccgcccggctacgtcggctacggacagggcggggtg
ctgaccgaggcggtgcggcggcggccgtacagtgtcgtgctgctcgacgaaatcgagaag
gcgcaccgcgacgtgcacgagatcttctttcaggtgttcgacaagggctggatggaagac
ggcgaggggcgctatatcgactttcgcaacacggtgatcctcctcacgtcgaacgtcggt
tccgagcgcgtgatgcagctgtgccgcgatccgcagcgcctgcccgatgcgcagaccttg
accgatgcgctgcgcgcgccgctgcgcgcgccgctgcgcgaggtgtttcccgccgcgttg
ttgggacgcctgacggtcgttccgtactacccgctcaccgacgagatgctcgcgcggatc
gtcgcattgcagctcgcgcgcatcgagcggcgcatcgaagcgcaccacggcatcgcgttg
cgctgcgcggattcggcgaccgcgctgatcgccgagcgctgccggacgatcgaatccggc
ggccgcatggtcgacgcgattctcacgcacacggtgctgccgcgcatcagccaggagatc
ctgcgcgcgacgatcgaggggcgcgcgctgcgggcgatcgacgtgagcgccgaagacggc
cagttcgtttaccgattcgaagaggagggcgcgacgtga

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