Burkholderia pseudomallei MSHR511: BBQ_745
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Entry
BBQ_745 CDS
T03012
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bpsm
Burkholderia pseudomallei MSHR511
Pathway
bpsm03030
DNA replication
bpsm03430
Mismatch repair
bpsm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBQ_745
03430 Mismatch repair
BBQ_745
03440 Homologous recombination
BBQ_745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsm03032
]
BBQ_745
03400 DNA repair and recombination proteins [BR:
bpsm03400
]
BBQ_745
Enzymes [BR:
bpsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBQ_745
DNA replication proteins [BR:
bpsm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBQ_745
DNA repair and recombination proteins [BR:
bpsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBQ_745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
GIY-YIG
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AHG34396
LinkDB
All DBs
Position
1:797088..798233
Genome browser
AA seq
381 aa
AA seq
DB search
MSASPPPHPAIDTPLAFVDLETTGGSAAEHRITEIGVVVVNANGVSTWTTLVDPQQPIPP
FIQQLTGITDAMVRGAPTFADIAGALFERLDGKLFVAHNASFDRGFLRAEFERAGIAFNP
DVLCTVRLSRALFPRESRHGLDALIERHALAPSARHRALADADLIWQFWQKLHAVIPAEQ
LSEQIVRTTRRFRLAGALTEAHLESAPAGCGVYALFGDGDAPLYVGRSVRVRQRLRALLT
GERRSSKETRLAQLVRRVEWRETGGELGALLAEADWIASLAPSFNRRSDRGATGDAHWPF
GGPVAFEERGESRVFHVIDQWRYVGAASSIERAATLAADARAAGEGARSAAPAVRRILQT
HLVRGLQLIPIPLAGAAPAAA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcgccgccgccgcatcccgcgatcgacacgccgctcgcgttcgtcgacctc
gaaaccaccggcggatcggccgccgagcatcgcatcaccgaaatcggcgttgtcgtcgtg
aacgcgaacggcgtatcgacatggacgacgctcgtcgatccgcagcagccgattcccccg
ttcatccagcagctcacgggtatcaccgacgcgatggtgcgcggcgcgccgacgtttgcc
gacattgcgggcgcattgttcgagcggctcgacggcaaacttttcgtcgcgcacaacgcg
agcttcgaccgaggctttctgcgcgcggagttcgagcgagcgggcatcgcattcaatccc
gacgtgctttgcacggtgcggctgtcgcgcgcgcttttcccgcgcgagtcgcgccatggg
ctcgacgcgctgatcgagcggcacgcgctcgcgccgtcggcacgccaccgggcgctcgcc
gacgcggatctcatctggcagttctggcaaaagttgcacgccgtgataccggccgagcaa
ctgagcgagcagatcgtgcgcacgacgcgccggttcaggctcgcgggggcgttgacggaa
gcgcatctggaaagcgcgcccgccggctgtggtgtctacgcgctgttcggcgacggcgac
gcgccgctctatgtcggccgaagcgtgcgggttcgccagcggctgcgcgcgctgctgacg
ggggagcggcgctcgtcgaaggaaacacggctcgcgcagctcgtgcggcgggtcgaatgg
cgcgagacgggcggcgagctcggcgcgctgcttgccgaggcggactggatcgcgtcgctt
gcgccatcgttcaaccggcggtcggaccgcggcgcgacgggcgatgcgcattggccgttc
ggcgggccggtcgcgttcgaggagcgcggcgaatcgcgtgtttttcatgtgatcgatcag
tggcgctacgtcggcgcggcatcgtcgatcgagcgggcggcgacgctcgcggccgacgcg
cgcgcggcgggcgaaggcgcgcggagcgccgcgccggcggtgcgccgcattctgcagacg
catctcgtgcgcgggcttcaactgattccgattccgctcgcgggcgccgcgcctgccgcc
gcctaa
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