Brucella pseudintermedia: NIK97_01815
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Entry
NIK97_01815 CDS
T08522
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bpsn
Brucella pseudintermedia
Pathway
bpsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIK97_01815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpsn03019
]
NIK97_01815
Messenger RNA biogenesis [BR:
bpsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NIK97_01815
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Regulator_TrmB
Motif
Other DBs
NCBI-ProteinID:
UWL60530
UniProt:
A0ABY5UB26
LinkDB
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Position
01:358420..360096
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AA seq
558 aa
AA seq
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MARSNTTELVFLPLGGVGEIGMNLAMYGYGPADNREWLVVDMGVSFAGPEQPGADLILPD
IRYLEAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEDGAPE
IPITVYNAGGKFEVGPFKVEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPV
IDEARFRAIGDAGVLALICDSTNALREGESPSERQVGESLRELIENARGRVAITTFSSNV
GRIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMI
LTGSQGEPRAALAKLARDEMRSLALSAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKII
GDEDALVHVSGHPRRNELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQVAQVRD
GDMLRLAPGKAEIIDEAPVGRIYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDRDHK
IVDEPDLVTFGVPEENAVGDLMEDILLDAAIEAIDSIPRVRRKDLELVRESVRRAVRAAA
NEAWGKKPVVTVFVNRIR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcccgatccaatactacggaactcgtctttctgccgcttggcggcgtgggcgaaatc
ggcatgaatttggccatgtacggttacggtcccgcggataatcgcgagtggctggtggtg
gatatgggcgtgagctttgcggggccggaacagcccggcgccgatctcatcctgccggat
atccgctatcttgaggctgaaaagcacaatctgcgcggcatcgtcatcacccatgcgcat
gaagaccattttggcgcgctgctcgatctgtggccgcgcctgaaagtgcctgtctacgcg
acgcctttcaccgccggtctgcttgaagccaagcggcagtcggaagacggcgcgcccgaa
atcccgattaccgtttacaacgcgggcgggaagttcgaggtcgggcctttcaaggtcgaa
gcggtggccgttacccactcgattcccgagccggtttcgctggccattaccacgccgctc
ggtacggtcgtgcacacgggcgactggaagatggacccggagccgtcgctggggccggtt
atcgacgaggcgcgtttccgcgctatcggcgatgcgggcgtgctggcgctgatctgcgat
tccaccaatgcgctgcgcgaaggtgaatccccttcggagcggcaggtcggcgagagcctg
cgtgagttgattgaaaatgcgcgtggccgcgttgcgattacgaccttctcctcgaatgtc
gggcgcatccgctccatcacggaagccgcgcgtgacgcgggccgtcaggtgctggtggtt
gggcgttcgatgaagcgcgcaatctccgttgcgaccgagcttggctatatggaaggcctg
ccggaatatctcagcgaagaggattacggctatattccacgcgagaatgtggtgatgatc
ctgaccggcagtcagggtgaaccgcgtgccgcgctcgccaagctggcgcgtgacgaaatg
cgcagccttgccttgtcggcgggcgacacggtcatctattcatcccgcgccattccgggc
aacgaaaaggccattctcgacatcaagaaccgcctgatcgatcgcggcatcaagatcatc
ggcgatgaggatgcactggtccatgtgtccggccatccgcgccgcaacgaattgcgccgg
atgtattcctgggttcgcccgcaaattctggtgccggtgcacggcgaggccgctcatctg
gtcgcgcaaggatcgctcggcgcgatggaaggcatcgagcaggtcgcgcaggtgcgtgac
ggcgacatgctgcgtcttgcccccggcaaggccgaaatcatcgatgaagcgccggtaggc
cgcatctacaaggacggcaagctgatcggcgacgaggaagaaatcggcatggtcgagcgc
cgcaagctcgcctatgtcggccatgtggccgtctctgttctgctggatcgtgaccacaag
atcgtcgatgagcctgaccttgtgacgttcggcgtgccggaagaaaacgccgtcggcgac
ctgatggaagacattcttctggacgccgcaatcgaggccatcgacagcattccgcgcgtg
cgccgcaaggacctcgagctggtgcgcgaatccgtgcgccgtgccgttcgtgctgcggca
aatgaggcatggggcaaaaagccggtggtgaccgtattcgtgaataggatacgctga
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