Brucella pseudintermedia: NIK97_01850
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Entry
NIK97_01850 CDS
T08522
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bpsn
Brucella pseudintermedia
Pathway
bpsn03030
DNA replication
bpsn03430
Mismatch repair
bpsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIK97_01850 (dnaE)
03430 Mismatch repair
NIK97_01850 (dnaE)
03440 Homologous recombination
NIK97_01850 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsn03032
]
NIK97_01850 (dnaE)
03400 DNA repair and recombination proteins [BR:
bpsn03400
]
NIK97_01850 (dnaE)
Enzymes [BR:
bpsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIK97_01850 (dnaE)
DNA replication proteins [BR:
bpsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIK97_01850 (dnaE)
DNA repair and recombination proteins [BR:
bpsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIK97_01850 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
UWL60537
LinkDB
All DBs
Position
01:365849..369340
Genome browser
AA seq
1163 aa
AA seq
DB search
MSDAAAASAANDGALTPRFVHLRVHSAYSLLEGALPLGKIIKQAIADEAPAIAVTDTNNL
FGALEFAQKASKDGLQPIIGCQIDVAFGDHADNGRSANRRVALDLAPIVLLAATEEGYAN
IVRLVSRAFLDTPAGDPVHVEAGWLPPLAKDVIVLSGGALGPIGRAFAADRPDRAEARLA
FLREAFGDRLYVELQRQAGYDRALEAKTVALAYEMDLPLVATNEAFFLKAEDFEAHDALL
AIAEGQILSNDDRRRLTPDHHLKSRAEMAALFADLPEALENTVEIAQRCSWYTQTRKPIL
PRFTGESDDPEAALQAEADELARQAREGLKMRLETAGLAEGYTAEQYAERLEYEIGIITR
MKFPGYFLIVADFIKWAKAHGIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNP
DRVSMPDFDIDFCQDRREEVIRYVQEKYGRDQVAQIITFGTLQARAVLRDVGRVLEMPYG
QVDRLCKLVPQNPANPVSLAQAIETEPKINEEREKEPVVGRLLDMALKLEGLYRHASTHA
AGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLETAVKLV
ARKGIEIDLSHVPLDDPLTYEMLSRGETVGVFQVESAGMRKALLGMRPDRIEDIIALVAL
YRPGPMENIPTYNARKNGEEEIASIHPKIDHLIKETQGVIVYQEQVMQIAQVLSGYSLGE
ADLLRRAMGKKIREEMDKQRVRFVDGAIEGGVDKAQANMIFDLLAKFADYGFNKSHAAAY
AIVSYQTAYMKAHYPVEFLAASMTYDMSNTDKLNDFRREANRLGIEVVPPSVMTSFRPFE
VGEKKIFYSLAAIKGVGEAAVDHIVAVRAEKPFESLEDFCERVDPRIVNRRVLESLINAG
AMDCFGRERPAMSAGMDRIMGFAQRTQENAASGQSDIFGLSGAPKEKLILPQAAPWLPSE
MLHREFQAVGFYLSAHPLDEYRDVLNRMRVQSWADFSAAVKRGANAGRLAGTVTARQERK
TRTGNKMGIVSLSDASGQFEAVLFSEGLAQYRDLLESGKSVVITVQAENRPEGIGLRIQT
VQSLEDEACRMQKAMRLYLRSADAVRHIAPHFNTRGDGQVSLIVIKDNGQREVEIELPHR
YRVSPQIASAMKSIQGVVDVELV
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgcagcagcagccagtgcagcaaatgacggtgctttgacgccacgtttcgtg
catctgcgcgtacactcggcctattccttgctggagggcgcgttgccgctcggcaagatc
atcaaacaggcgattgccgatgaggccccggctatcgcagtcaccgacaccaacaatctg
ttcggtgcgcttgaatttgcgcagaaggcatcgaaggacgggctgcagccgattatcggt
tgccagatcgatgttgccttcggcgatcatgccgacaatggacgcagcgccaatcgccgc
gtcgcgctggaccttgcccccatcgtgctgctcgcggcgacggaggagggctatgcgaat
atcgtgcggctcgtcagccgcgcctttctggacaccccggcgggtgatccggtgcatgtc
gaggcgggctggctgccgccattggcgaaagatgtcatcgtgctttccggcggcgcattg
gggccgatcggtcgcgcttttgccgccgaccgccccgacagggccgaggcgcggcttgcc
tttctgcgggaagccttcggcgacaggctttatgtcgagttgcagcgtcaggcaggctat
gaccgtgcgctggaagcaaagaccgtggcgcttgcctatgagatggacctgcctctggtg
gccaccaatgaggctttctttctcaaggcggaagatttcgaggctcatgatgcgcttctc
gccatcgcggaagggcagattctctcaaacgatgatcgccgccgcctgacgccggatcat
catctgaaaagccgtgcggaaatggcggcgctctttgccgatctgccggaagcgcttgaa
aacacggtggagattgcccagcgctgcagctggtacacgcagacgcgcaagccgatcctg
ccgcgcttcacgggcgaatcggacgatccggaagcggcgcttcaggccgaggctgacgaa
ctggcgcggcaggcgcgtgagggcctgaaaatgcggcttgaaacggcgggcctcgcggaa
ggctatacggcggaacaatatgccgagcgtctcgagtacgagatcggcatcatcacccgc
atgaagtttcccggctacttcctgatcgttgccgacttcatcaaatgggccaaggcccat
ggtattccggtcgggccgggccgtggttcgggtgccggttcgctcgtcgcctatgcgctg
acgattaccgacgtcgatccgctgcgtttctccctgcttttcgaacgcttcctcaacccg
gaccgcgtttcgatgcccgacttcgatatcgatttctgtcaggatcgccgcgaagaggtg
atccgctatgtgcaggaaaaatacgggcgcgatcaggttgcgcagatcatcactttcgga
accttgcaggcccgcgctgtgctgcgcgatgtggggcgcgttctggaaatgccttatggt
caggtcgaccgcctgtgcaagctggtgccgcagaacccggccaatccggtgtcgctggcg
caggccatcgagaccgaaccgaagatcaacgaagagcgcgagaaggagccggtcgtcggg
cggcttctcgatatggcgctcaagcttgaggggctttaccgccacgcctcgacccacgct
gccggtatcgtgatcggtgaccgtccgctgtccgaactggtgcccatgtatcgcgatccg
cgttccgacatgccggtcacccagttcaacatgaaatgggtcgagcaggcgggactggtc
aagttcgactttctcggcctcaagacgctgaccgttctggaaacggcggtcaagctggtg
gcgcgcaagggcattgagatcgacctgtcccatgtgccgctcgatgatccgctcacttat
gaaatgctgtcgcgcggcgaaacggtcggcgtgttccaggttgaaagtgcgggtatgcgc
aaggcgctgctcggcatgcgcccggaccggatcgaggacattattgcgcttgtggcgctt
tatcgtcccggcccgatggagaacatcccgacctataatgcgcgcaagaacggcgaggag
gagattgcctccattcacccgaagatcgaccacctgatcaaggaaacgcagggcgttatc
gtctatcaggaacaggtgatgcagatcgcgcaggtgctttcgggctattcgctcggtgaa
gccgaccttctgcgccgcgccatgggcaagaagatccgcgaggagatggacaagcagcgc
gtccgttttgtggacggcgcgattgagggcggcgtcgacaaggcgcaggccaacatgatc
ttcgacctcttggccaagttcgccgactatggcttcaacaagtcgcacgccgccgcttat
gccatcgtctcctaccagacggcctatatgaaggcgcattatccggtcgagttcctcgcc
gcgtcgatgacctacgatatgtcgaacaccgacaagctcaacgatttccgccgcgaggcg
aaccgtctgggcattgaggtcgtgccgccgtcggtgatgacttctttccgtccgtttgag
gttggcgagaaaaagattttctactcgcttgccgccatcaagggcgtcggcgaggcggcc
gtcgatcatattgtcgcggtgcgggccgaaaagccctttgaaagccttgaggatttctgc
gagcgggtcgatccgcgcatcgtcaaccgtcgggtgctggaaagcctcatcaatgccggc
gcgatggattgcttcggtcgcgagcgcccggccatgagtgctggcatggaccgcatcatg
ggctttgcccagcgcacgcaggaaaatgccgcaagcggccagtccgatattttcggcctg
tccggcgcgcccaaggaaaagcttatcctgccgcaggcagcaccttggctgccttcggaa
atgctgcatcgcgagtttcaggcggtcggcttctatctgtcggcgcatccgctcgatgaa
tatcgcgacgtgctgaaccggatgcgcgttcaaagctgggcggatttctccgccgccgtc
aagcgcggcgccaatgccgggcgtctggcgggcaccgtgaccgcccgtcaggagcgcaag
acccgcaccggcaacaagatgggcattgtgtcattgtcggacgccagcggccagttcgag
gcggtgctgttttcggaagggctcgcgcaatatcgcgatctgctggaaagcggcaagtcg
gtggtgatcacggttcaggcggaaaaccgacccgaaggcattggcttgcgcatacagacg
gtgcagtcgctcgaagatgaggcctgccggatgcaaaaggcgatgcggctttatctgcgc
tcggccgatgcggtccgtcatatcgcgccgcatttcaacacgcgcggcgacggtcaggtg
agcctcatcgtcatcaaggataacggccagcgcgaagtcgaaatcgaattgccgcaccgt
tatcgcgtcagcccgcagatcgccagcgccatgaaatccattcagggcgtcgtggacgtg
gagctggtctga
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