KEGG   Brucella pseudintermedia: NIK97_08680
Entry
NIK97_08680       CDS       T08522                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bpsn  Brucella pseudintermedia
Pathway
bpsn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpsn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NIK97_08680 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpsn03021]
    NIK97_08680 (rho)
   03019 Messenger RNA biogenesis [BR:bpsn03019]
    NIK97_08680 (rho)
Transcription machinery [BR:bpsn03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     NIK97_08680 (rho)
Messenger RNA biogenesis [BR:bpsn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NIK97_08680 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_22 AAA_25 S1CSD-TOTE-2 AAA DUF6360 Fungal_virus_P2_C
Other DBs
NCBI-ProteinID: UWL59595
UniProt: A0ABY5UCT6
LinkDB
Position
01:complement(1783703..1784968)
AA seq 421 aa
MQEMKLQELKNKTPVELLAFAETLEVENASAMRKQELMFAILKKLAAQDVEIIGEGVVEV
LQDGFGFLRSADANYLPGPDDIYISPSQLRRFSLKTGDTVEGPIRGPKEGERYFALLKVN
TINFEDPEKIRHKVHFDNLTPLYPNERFKMELEVPTSKDLSPRVIDLVAPLGKGQRGLIV
APPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAA
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPA
MDILKSGTRKEDLLVPRADLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKSNGEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaggaaatgaaactacaagaactgaaaaacaagacaccggtggagctgctggctttt
gccgaaacgcttgaggtcgaaaacgcgagcgccatgcgcaagcaggaactgatgttcgcg
atcctcaagaaactggcagcccaggacgtcgaaattatcggcgaaggcgtcgtcgaggtg
ctgcaggatggatttggcttcctgcgttccgccgacgctaactatctgccgggtcctgac
gatatttatatttctccctcgcagctgcgtcgtttctcgctcaagaccggcgatacggtc
gaaggaccgatccgcggccccaaggaaggcgagcgttatttcgcgctgctcaaggtcaat
acgatcaatttcgaagatccggaaaaaatccgtcacaaggttcacttcgacaatctgacg
ccgctctacccgaatgagcgcttcaagatggaactggaagttccgacctccaaggatctg
tcgccgcgcgtcatcgatctggtggcaccgctcggcaagggccagcgcggcctgatcgtc
gcgccgccgcgtaccggtaagaccgttcttctgcagaacattgcccattcgatcaccgca
aaccatcccgaatgctatctcatcgttcttctgatcgatgaacgtccggaagaagtgacc
gacatgcagcgttcggtgaagggcgaagtgatttcgtcgactttcgatgaaccggcggcg
cgtcacgttcaggttgccgaaatggtcatcgaaaaggccaagcgtcttgtcgaacatggc
cgcgacgttgtgattctgctcgactcgatcacccgcctcggtcgcgcctacaacacggtt
gttccgtcttccggcaaggttctgaccggcggtgtcgacgccaacgcgcttcagcgtccg
aagcgcttcttcggtgctgcacgcaacatcgaagagggtggctcgctcaccatcatcgcc
accgcgctgatcgatacgggcagccgcatggacgaagtgatctttgaagaattcaagggc
actggcaactcggaaatcgtgctcgaccgcaaggtggccgacaagcgtatcttcccggcc
atggacattctcaagtccggcacccgcaaggaagacctgctggttccgcgcgccgatctg
cagaagattttcgttctgcgccgtattctcgcgccaatgggcacgaccgacgcgatcgaa
ttccttatcgacaagctcaagcagaccaagagcaatggcgaattcttcgattcgatgaat
acgtaa

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