Brucella pseudintermedia: NIK97_08870
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Entry
NIK97_08870 CDS
T08522
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bpsn
Brucella pseudintermedia
Brite
KEGG Orthology (KO) [BR:
bpsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpsn03400
]
NIK97_08870 (addB)
Enzymes [BR:
bpsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIK97_08870 (addB)
DNA repair and recombination proteins [BR:
bpsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NIK97_08870 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UWL59631
LinkDB
All DBs
Position
01:1819166..1822312
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AA seq
1048 aa
AA seq
DB search
MSARRPRDGKQRLFSIPPGTPFLPAFANALLEGRLVEGFPGNPSDPLVLANATIYVPTRR
AARALRSILVDKNRARSAILPTIKPLGDVDEDAAFFNAGSSGVFDINPPIGTAERLLLLA
RLIRPWRESLPSHVRALFGVDDVSVPATTADAIWLARDLAGLMDQVETDGAAWSELASIA
PEDLADWWQVTLGFLNIVTNLWPDILAERKLSNPAAHRNDLIWSEVKRLRTHPPAGPVIV
AGSTGSIPATAELISAIADLPNGAVVLPGLDRDLDDAAWQLLASVTDNPSTYGHPQFGLR
KLLDAMQTLREDVEHLDDMPVSKRLRERVVSEALRPAETTDAWGKLDIEADSLHMAAQTI
DLIEAANEREEALAVALALRDAINEEGKTAALVTADRNLARRVVGELARFGIDADDSGGR
HLRDVETTTLLRLLVETVFNPGDPVALLALVKHPLLRLEAPRIERRLAAETLELIAFRGG
TGRASVLDLPAFFDRRLEESASQPWLPAWHDTVTPDMIAAARNLCESLSNAVAPLAPFVL
AGRRTEIGEIARATVEALENLARNEKASVAPFYSGERGEQLAAFLRGLVSSEAGLDFEAS
EWPAVLDALMAGETVKPHPGGHPRLFIWGALEARLQTMDTVVIGGLNEGSWPARTRNDPF
MSRPMKSMIALDPPERRTGLAAHDFQMALGMDHVVLTRSQRSDNAPTVASRWLQRLETVL
GADVTAQMRRRGARFIQWSREIDQAPDVPFVKRPEPAPPVAARPKHFSVTEIETLRRDPY
AIFAKKILKLRPLEPLIRDPAAAERGTLFHDILGHFTQEAIDPLAPDAAERLMELGRILF
ADMDLPTEIEAVWWPRFTALIPQFLAWEGERAYNVQTRFAEISSDKREVEGLGVTLSGRA
DRIDLMRDGTAEIIDYKTGSTPSPKQAHVLLSPQLALEAALLVRGAFRELGSVRASDLTY
VRLKAGGEVKPESILKIGRPPSEKTAPALGEESWQRLAQLLAEYQKPEKGYLSRALPFRE
TDLTGDYDHLARVLEWSAGGDAGGEGEA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacgcagacccagagatgggaaacagcgcctgttttcaattcctcccggcaca
ccgtttttgccagcctttgccaatgcacttctggaagggcggctggtcgaaggttttccc
ggcaatccttccgatccgctggtactggccaatgcaaccatctacgtgccgacgcgccgc
gcggcgcgtgcgctaagatcgattttagtagataagaatcgagctagaagcgctatattg
ccgacgataaaaccgctcggcgatgtggatgaggatgccgcttttttcaatgccggttcg
tcgggcgtgttcgacatcaatccgcctatcggcacggcggagcggcttctgcttctggcg
cgattgatccgtccatggcgggaatcgctgccctcccatgtgcgtgccttgtttggcgtt
gacgacgtttccgttccggcaaccactgccgatgcgatctggcttgcccgcgatctggcg
gggttgatggatcaggttgaaaccgacggagctgcatggagcgagcttgcgagcattgcc
ccggaagacctcgccgactggtggcaggtcacgctcggctttctcaatatcgtcaccaat
ctgtggccggatattctggcggagcgtaagctctcaaaccccgcagcgcatcgcaacgat
ctcatatggagtgaggtaaagcggctgcgcacccatccgcccgccggtccggttatcgtc
gctggttccaccggctccataccggcgactgcggaactgatttccgccatcgccgacttg
ccgaatggagcggtggtgctgccggggctggaccgcgatctcgatgatgcggcctggcag
ctgctggcatcggtgaccgacaatccctcgacttacggtcatccgcagttcggtttgcgc
aaacttctggatgctatgcagaccttgcgcgaggatgtggaacatctggacgatatgcca
gtctccaaacgcctgcgcgagcgggtggtaagcgaggcgctgcgcccggcggaaacgacc
gatgcgtggggcaagctcgatatagaggcggacagtctgcacatggccgcgcagacgatc
gacctgattgaagctgccaacgaacgcgaagaagcgctcgccgtcgcgcttgccttgcgt
gatgcgatcaatgaggaaggcaagacggcggccctcgtcaccgccgaccgtaatctggcg
cggcgcgtggtgggcgaacttgcccgtttcggcatcgacgccgacgattcgggcggacgg
catctgcgcgatgtcgaaaccacgacattgctgcggctgctggtcgaaaccgtgttcaat
ccgggcgatccagttgccttgctggcgttggtcaagcatccgctactgcggctggaggcc
ccccgcatcgaacgccgccttgccgccgaaacgctcgaactcatcgcctttcgcggcggc
acgggccgcgcttccgtgctcgatcttccggcatttttcgaccggcggctggaggaaagc
gccagccagccgtggctaccggcatggcacgacacggttacgccggatatgatcgccgct
gcgcgaaatctttgcgaaagcctgtcgaatgccgtggcgccgctcgcacctttcgtcctc
gctggccgcaggaccgagatcggcgaaatcgcacgcgccacggtcgaggcgctggaaaat
ctggcgcgcaacgaaaaggccagtgtcgcgcctttttattccggcgaacgcggagaacag
ctcgccgcctttttgcgcggactggtttcaagcgaagccgggcttgattttgaagcttcc
gaatggccagccgtgctggatgccttgatggcgggtgagacggtcaaaccgcatccgggc
ggtcatccgcgcctcttcatctggggtgcgctggaggcgcgcctgcaaaccatggatacg
gtggtgatcggcggtctcaatgagggaagctggcctgcccgcacccgcaacgatccgttc
atgtcgcgcccgatgaagtcgatgatcgcgctcgatccgcctgaacggcgcaccggcctt
gccgcccacgatttccagatggcgctgggcatggatcatgtcgtgctgacgcgctcgcag
cggtccgacaatgcgccgacggttgcctcgcgctggctgcagcggctcgaaacggtgctg
ggcgctgatgtgaccgcacaaatgcgcaggcgcggggcgcgtttcatccagtggtcacgg
gaaatcgatcaggcacctgacgtgcctttcgtcaagcgcccggaaccggccccgcctgtt
gccgcccgtccgaagcatttttcggtgacggaaatcgaaacgctgcgccgcgatccctat
gcgatctttgcgaaaaagatactgaaactgcggccacttgagcctttgatccgtgatccg
gcggcggcagaacgtggcactttgttccacgatattctgggtcatttcacgcaagaggca
atcgatccgctggcacccgatgccgccgaacgcctgatggagcttggccgcattcttttt
gccgacatggacctgcctaccgaaatcgaggccgtgtggtggccgcgcttcacggcgctc
attccgcagtttctggcctgggagggcgagcgcgcttataatgtccagacccgctttgcc
gagatttcctccgacaagcgtgaggttgaaggacttggcgtcacgctttccggccgcgct
gaccgcatcgacctgatgcgcgacgggacagccgaaatcatcgattacaagaccggctcg
acgccatcgcccaaacaggcgcatgtgctgctgtcgccacagctggcgctggaagccgca
cttctggtgcgcggtgcgtttcgtgaactggggtcggtccgcgcttcggatctcacctat
gtccgtctcaaggcgggcggcgaggtaaagccggaatccatcctcaagatcggacgaccg
ccatcggaaaaaactgccccggcgcttggcgaggagtcctggcagcggttggcgcaactg
ctggcggaatatcagaagccggaaaaaggctatctttcccgtgcattgccgttccgcgag
acggacctgacaggcgattacgatcatctggcgcgggtgctggaatggtctgccggtggc
gacgcgggcggggagggcgaggcatga
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