Brucella pseudintermedia: NIK97_10180
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Entry
NIK97_10180 CDS
T08522
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bpsn
Brucella pseudintermedia
Pathway
bpsn02020
Two-component system
bpsn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpsn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NIK97_10180 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NIK97_10180 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpsn03021
]
NIK97_10180 (rpoN)
Transcription machinery [BR:
bpsn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NIK97_10180 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Arg_repressor
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
UWL59876
LinkDB
All DBs
Position
01:2108965..2110503
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AA seq
512 aa
AA seq
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MALSPKLDFRQSQSLVMTPQLMQSIRLLQMTHVELEQFLDAEIEKNPLLDRIEAANDDFA
GSDSLRDDGEAGEREIESHTSEDDWFKTEDSGDAETLSSAFDSSLENIFPDDPGRSDEIG
PDLAAQWKSSVADGYVSASAYDIDQVTASRVSLGEHVAEQIALTFSGTMDRFIATALADA
LDESGYLRVDIVGLAQNLGVETAEIERVLGMMQSFDPHGLFARDLRECLAIQLRLKDRFD
PAMEALIDNLDLLARRDFAALKKLCGVDQADILDMLTEIRMLDPKPGASFDVPVADAIVP
DVLVTPSRDGGWAIELNAAAMPRLIVNNEYYAEVSASVKVEEKAFLSDCMQTASWLVRSL
DQRARTILKVTQEIVRQQDGFLRHGVTHLKPLNLRTVADAVGMHESTISRVTANKFMATP
RGVFELRYFFNASIASSEGGDAHSSESVRHRIRQMIDAEKPDEVLSDDAIVDALKKDGVD
IARRTVAKYRESMNIASSVQRRREKKARLSAS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtcgcccaagctcgatttccgtcagtcgcagtcgctggtaatgaccccccag
ttgatgcagtcgataagactgctgcagatgacgcatgtagagctggaacaatttcttgac
gctgaaatcgaaaaaaatccgctgctggatcgaatcgaggcagcgaatgatgattttgcg
ggctcggattccctgcgcgacgatggagaagccggtgagcgggagatagagtcccatacg
tcggaggacgactggttcaagacggaagactccggtgatgcggagacactttcttctgcc
ttcgacagttcgcttgagaacatctttcccgacgatccggggcgatccgatgaaatcggg
cctgatcttgccgcgcagtggaaatcgtcggtcgcggacggatatgtttcagccagcgct
tatgacatcgatcaggtgacggcaagccgggtttcgctcggcgagcatgtggcggaacag
atcgcgctgactttttctggaacgatggaccggttcatcgcgacagcgcttgctgatgcg
ctggatgagagcggctatctacgggtcgatatcgtcggtctcgcccagaatctgggcgtg
gaaacggccgaaatcgagcgcgtgctgggcatgatgcaaagctttgatccccatggcctt
ttcgctcgcgacctgcgggagtgcctggcgatacagttgcgcctcaaggatcggttcgat
ccggcgatggaagcattgatcgataatctcgatctactggcgcggcgtgatttcgcggcg
ctcaagaaactgtgcggtgtcgatcaggccgatattctcgatatgctgactgaaatccgc
atgctcgatccaaagccgggcgcgtcgtttgacgtccctgtcgccgacgccatcgtgccg
gatgtgctggtgacgccatcgcgcgatgggggatgggctattgaactgaacgctgcggcc
atgccgcgcctcatcgtcaataatgaatattatgccgaggtcagcgcctccgtaaaagtg
gaggaaaaggcgtttctctcggactgcatgcagaccgcgagctggcttgtgcgcagcctt
gaccagcgcgcgcgcaccatcctcaaggtcacgcaggaaatagtccggcagcaggacggt
tttctgcgccacggagtgacccatttgaagccgctcaacctgcgcaccgtcgccgatgcg
gtcggcatgcatgaatccaccatcagcagggtgaccgcgaacaagttcatggcgacgcca
cgcggcgtgtttgaattgcgttatttcttcaatgcttccattgcgtcgtcagaaggcggc
gatgcgcattcatcggagagcgtgcgccatcgtatccgccagatgattgatgccgaaaag
cctgacgaggtgctttccgatgacgccatcgtggatgctctgaagaaggacggtgtggat
attgcgcgaagaacggtcgcaaaataccgggaatcgatgaatattgcctcatcggtacaa
cgcagacgcgaaaagaaggcgcgactgtctgcttcctga
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