Brucella pseudintermedia: NIK97_12980
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Entry
NIK97_12980 CDS
T08522
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
bpsn
Brucella pseudintermedia
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
AC_1
Motif
Other DBs
NCBI-ProteinID:
UWL62450
LinkDB
All DBs
Position
02:201427..206172
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AA seq
1581 aa
AA seq
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MKINLAFKMLLLAGTCLLSVQNSLADTKYGGGGGKGGTSADGIAVGGEGGGISHSGGQGG
GMNSTGAFPPNDGNGGDGTNNAKGGGGGKGGVLGATINDSTEPLPNFQKAAGEDGGLSQD
AGGGGGGALAIINAQEYTVNGVIMGGVGGEGSDLQTNNMARGGGVALILNGSVFTVGAGS
RVLGGQGGAKERPNFNPLTDEYGGGGGLSIILNQGRLEIYAEVRGGASGNTLRGGDYTGQ
AVYEGSPGGGLYMKGGTTVNVYSTGFIATGMVTYAKHKAPPALILEGDGSIIDNQGSIFR
AFDSSLQNTDAESVPAIYVLGNNNKVINSKLILGNYTTADSPGGSSAYAIEFEGNQNTLE
LWGGQNMRGVVNITNGTGNHLVLGGTNPGTFNFGTLDHIDPGDSRSQRTGYMGFADFTKN
GVGTWTGGGVSQATGPWTIDEGTLALIDDGSLESHRSVTLNANLDISGVTSATAMKDFSG
SSGSTINLGSKTLVLKNTQPQTFAGTASGTGGGIQIDMGTAIFTGDNTYTGLSTVAAGAT
LQLGAAGMTGSIAGDAAVDGHLIFNRSDNPTYAGAISGAGSVQKLGGGILELSGDSGAFA
GSTSVDAGGLFVSGVLGGTLAVNTGTTLAGTGTIGGNTTIADGATLIGQQGHVLTFQNNL
SLYSGSIVSVSLGRAPNAPGLFNVQGDLALNGTLNILDIGDFGPGLYRLFDFGGTRSGGL
TLGTVPIGTDPTRLQFITDIPNQYDLYYTSEPGFNMWDGGDITRHDNGAVDGGDGVWDGS
NNNWTTFDGAHNSIWSDDEVAQFGVRAGTVTVDDSTFPIRASGLVFSIDGYRLTGGHIVL
FDPVDGVPTIRVGDGSSAGAAMTATIETELRGEQGFKKVDFGTLVLTGTNTYTGVTTVSH
GTLQLGDGGNSGSILGDVVVDGDLYGRGTLAFNRSDEYAFSGAISGNGIVVQRGSGTTVF
EGNNTFTGGLTVEKGTAKAGIQDHAFGSGLLTVEKDGTADLANLNETVGGLTGGGYVALG
SGTLTLEQNINTTFSGMMDGAGGLNKNGNGTLTLSGTGSYAGETNVNGGALVQGAAGAFS
SASTYLVANNALIDLGGHDTDMAGLSNSGTVNFGGSGGTTLNVAGNYVGNGGMFVINSVL
NGDDSKTDMLKVGGDTSGNTNLKVVNRGGLGAQTVNGIEVVDVGGQSNGTFSLLGDFVTK
DGKQAVRGGAYAYTLQQGPGTGGNDGNWYLTSQFVDQDCHLTNTCPQPVPPAPRYSPSVP
VYEGYLQNMQALNKLPTLQERVGERYWTGRNGDGQATGAAVDDKGVWARVEGAHNRLEPD
TSLSRMKQDINTFIMQAGVDGQFYESDNGKLIAGITGQYGHAKGDISSFHGDGAISTDGW
SLGATATWYGTSGFYVDGQAQVTWFDSDLNSWTANQGLADGRKATGYALSIEAGQRFAID
QNWSLTPQAQLMYSSINADSFRDAWDSRVSLHDGDSLIGRLGLAANYANSWQGKDGLTVN
TTVYGIANLYQEMLSGSSVNVAGVAFDTDNDRTWGGIGAGGTYAWADNKYAVYGEGTINT
ALNHFADSYTLKGTVGFKVKW
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaatttagctttcaagatgttattattagcaggaacctgccttctttcggtg
cagaactcgctagcggacacgaaatatggaggcgggggcgggaaggggggcactagcgct
gatggcattgccgtaggcggggaaggtggaggtatatcgcattccggcggccagggcgga
gggatgaatagcacgggagcttttccgcccaatgacggcaatggcggggacggcaccaac
aatgccaagggtggggggggaggaaagggcggggtccttggggccactattaacgattct
acagaacccttacccaatttccagaaagccgcaggggaagacggggggctttcacaggat
gcgggcggcggcggcggcggcgcgctggcgattatcaatgcgcaggaatatactgtgaat
ggcgtgataatgggcggcgtcggcggcgaaggaagcgaccttcagacaaataatatggca
aggggtggcggggtggcgcttatcctcaacgggagcgtttttaccgttggagctggtagc
cgtgttttgggtggtcaaggaggagcgaaagaaaggccgaacttcaatcctctaacggat
gaatatggcggcggcggcgggttgagtataattctgaaccagggcaggttggagatttac
gcggaggtccgcggaggggctagcggcaacacgttaaggggtggagactacacgggacag
gcagtgtacgaaggttccccgggcgggggcctatatatgaagggcggcacaacggttaat
gtttattccacgggcttcattgccacgggtatggttacctacgcgaagcacaaagctcct
cctgctctcattctcgagggagacggcagtattatcgacaatcagggcagtattttcaga
gcttttgatagcagcctacaaaacacggatgctgaaagtgtccccgcaatatatgttttg
ggcaacaacaacaaagttataaattcgaaactcatcctgggcaactacacaacggctgac
agtcctggtgggtcgagtgcatacgcgatcgagttcgaaggcaatcaaaacaccctggag
ctctggggcgggcaaaatatgcgcggcgtcgttaatattaccaacggcacaggaaaccat
ctcgttctcggtgggacgaatccaggtacgttcaacttcggcaccctggatcatatcgat
cctggggattcccgcagccagagaacgggctatatgggttttgctgatttcacaaagaac
ggggtgggcacctggactggcggaggcgtgtctcaggcaaccggcccctggacaatcgac
gagggtacgctggcgctgattgatgatggcagtcttgagtcgcataggagtgtgacactg
aatgccaatctcgatatttccggcgttaccagcgcgaccgcaatgaaagacttttctggc
tcttccggcagcacgatcaatctgggaagcaagacgcttgtgctgaaaaacacccagccg
caaacttttgccggcaccgcctcaggaaccggcggcggcattcagattgatatgggcacg
gcaatctttaccggtgacaatacctatacaggcttgagtaccgtcgcggcgggagcgacg
ttgcagctcggcgcagccggtatgaccggcagcattgcgggcgacgctgcagtcgacggc
catttgattttcaatcgatcagataatccgacttatgcaggagcgataagcggtgcgggc
agcgttcagaagcttggcggcggcattctggagctgtctggcgatagcggtgcattcgcg
ggatctacatccgtggacgccggaggactgtttgtaagcggcgttttggggggcaccctg
gctgtcaatacaggaaccactcttgcgggaacaggtacaatcggcggcaatacgacgatc
gcggacggagcgacgcttatcggtcaacaaggccatgtcctgacctttcagaataacctg
tctctatacagcggcagtattgtaagcgtaagcctcggccgtgcgcctaatgcgccgggt
ttgtttaatgttcagggggatttggccctgaatggcacattgaacatactggacatcggc
gatttcggaccgggcctgtatcgtctgttcgattttggcgggaccaggtctggcggactg
acactggggactgtcccaattggaacggaccccacccggttgcagtttatcaccgatata
ccaaaccaatacgatctctactatacgtctgaacctggctttaatatgtgggacggcggc
gatattacgcggcacgacaatggcgccgtggacggtggagatggcgtatgggatggttcc
aataataactggacaacctttgacggcgcgcacaacagcatatggagtgatgatgaagtc
gcccagttcggtgtgagggcagggaccgtcacagtcgatgacagtacgttcccgatcagg
gcgagtggtcttgtattttcgatcgatggttatcggctgacgggtggccatattgttctc
tttgaccctgttgacggcgtgccgacgatccgtgttggtgacggttcttccgccggagca
gccatgaccgcgaccattgagacggaactgcgcggtgaacaaggtttcaaaaaagtcgat
ttcggcacactggttctgaccggcaccaacacctatactggtgtcacgacggtcagccat
ggaacgcttcagctcggagacggcggcaatagcggcagcattttgggcgatgtggtggtg
gacggcgatctatatggtcgtggcacgctggccttcaaccgttcggatgaatatgcattt
tccggtgcgatcagcggaaacggcattgtcgtgcagcgcggcagcggcacgacggtgttt
gaaggcaacaacacgttcaccggcggtctgacggtcgagaagggcacggcgaaggccggc
attcaggatcacgcctttggttctggcctgctgacggtcgagaaagacggcactgccgat
ctggcaaatttaaatgaaacagttggcggccttacgggaggcggctatgtagcgcttggc
tccggcacgctgacgcttgagcagaacatcaatacgaccttttccggcatgatggacggg
gccggaggccttaacaagaatggcaatggcacgctgacgctttccggcactggcagctat
gcgggcgagaccaacgtcaatggcggcgctctggtgcaaggtgccgcaggcgctttctcc
agcgcttccacctatttggttgcaaacaatgccctgatcgatcttggcggccatgacacc
gacatggccgggctctccaattccggcacagtcaatttcggcggttcgggcggcaccacg
ctgaacgttgccggcaactatgttggcaatggcggcatgttcgtcatcaacagtgtgctg
aatggggatgattccaagaccgacatgctgaaggtcggtggcgatacgtccggcaacacc
aatctgaaagtcgtcaatcgcggtggacttggggctcagaccgtcaatggcatcgaagtg
gtcgatgtcggtggccagtcgaacggcaccttctcgctgctgggtgactttgtcaccaag
gacggcaagcaggcggttcggggtggggcgtatgcctacacgctgcaacagggccccggt
accggcggcaacgatggcaactggtatctgaccagtcaatttgttgatcaggattgccat
ctgacaaatacttgtccacaacctgtgccgcctgctccacgttacagcccgtcggttccg
gtttatgaaggctatctgcagaacatgcaggcgctcaacaagctgccgaccttgcaggaa
cgtgttggcgagcgctactggacgggacggaacggcgatgggcaagccacaggtgccgcc
gttgacgacaagggcgtgtgggcgcgtgtcgaaggggcacacaatcgccttgaaccagat
acgtcgctgagccgcatgaagcaggacatcaacaccttcatcatgcaggccggtgtcgac
ggtcagttctatgagagcgacaatggcaagctgatcgccggtatcaccgggcaatatggc
catgccaagggcgatatctcctccttccacggcgatggtgcgatcagcaccgatggctgg
agccttggcgcaaccgcgacctggtatggcacttccggcttttatgtcgacggtcaggca
caggtgacgtggtttgacagcgatctcaactcctggacagccaatcagggtcttgccgat
ggccgcaaggcaaccggctatgccttgagcatagaagcaggccagcgctttgccatcgat
cagaactggtcgctgacgccgcaggcgcagctcatgtactcctccatcaatgccgacagt
ttccgcgacgcatgggatagccgtgtcagcctgcatgacggcgacagcctgatcggacgg
ctcggccttgccgccaactatgccaatagctggcagggcaaggatggtttgacggtcaac
accaccgtctatggcattgccaatctctatcaggaaatgctgagcggttcgtcggtgaac
gtggcgggcgtcgccttcgacaccgacaatgaccggacctggggtggtatcggcgctggc
ggcacctatgcctgggccgacaacaaatatgccgtctatggcgagggcacaattaacacc
gcgctcaaccacttcgccgacagttacaccctcaagggcaccgtcggtttcaaggtcaag
tggtag
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