Burkholderia pseudomallei A79A: X996_118
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Entry
X996_118 CDS
T03498
Name
(GenBank) RHS repeat-associated core domain protein
Organism
bpso
Burkholderia pseudomallei A79A
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TcdB_toxin_midN
FG-GAP_3
RHS_repeat
SpvB
FG-GAP
DUF6443
TcdB_toxin_midC
Motif
Other DBs
NCBI-ProteinID:
AIV97861
LinkDB
All DBs
Position
1:152012..158110
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AA seq
2032 aa
AA seq
DB search
MAKTSGTADEILNLPSGGGSVSGDGGDFSVDLNTGTATLKFDLTVPAGPNGITPPHTLQY
SAGAGDGAFGIGWSLGLMTIRRRITPATGAAEPAPPGACSLVGVGELVDMGARRFRPIVD
ATGLLIEFTGASWTATDKTDTQYTLGTSANARIGGGGALPAAWLVDRCADSAGNAIAYTW
LDVGGARVPQAIAWGTYRLDFVYEARPDVLVDGSYGAPVTLDKRCARIELHATTEAPSLV
RSWTLLYDDGGGRGRSLLATIREQGHAADGSILAAPERTFAYSSPGAPALVPVTGWTTPL
SDPNTDLVDLNGDGLPDIVHLGHGMPTMHPNLGGGQFGAPRPLARTAAPLRLSAPSVAFA
DMSGNGSVDVLVLDAPFSGYYPLAAPGGSAPAGFGRPIVFERAPAVSPSDVRLRFVDLNG
DGITDILLDTGRGWLAYLRDGPASWSDAPRVLPPARTPPVSLADPHVHLADMTGDGLMDI
VRVTGGGLTYWPARADGGWDAAIAMTPSPAFGRDFDPHRLALYDVDGDGCADLVYVGLQS
VTLWRNVGATRLAAPVAIPGTPVALPGSYRIVDLLGSGTAGVHFQLPSIAGASRQSYLDL
GGGVKPYLLTDLAHGAAQSTHIGYRTSTEYARDDAQAGAPWRTYHPFPIQCVARTDQTDH
GTGATTSTRYAYHDARYDPATRTFLGFGRVDSEQLGDASCPTLRVETTFHLGLDPADPAR
PLTGDEALKLGALRRKPLVTATYGLDGSPLEHRPYSITRHAYDALLVASTADNGKRIAVP
YCTTSTEERWERQSAAVSARTVDYLAITSEGDVTSQRTRAQRAGIAAPDQDVTTTTTLAT
GGKNLRLPARVTQTAPGGDIVSESICFYDGDAFAGLPEGQATRGLVTRIEDRVFDDAFVA
SVWGDTPPDLTQYGYHRLPGEAGSWWKTRRAHARGANASGPTLATKGPLGALQTLQYDAS
SQRVVKVIDALGNAVAATTDARVFQTASLTDANGHRTADAFDALGRVVATIGPLDTPALP
TIAFTYTVGAISTVTSATRGTHGGADAVPALTWIDGTGNVLGKGTPAAAPGEWTVTHAVR
RNARGLVAASFLPYAATGANWQPPPADTGATTSTYDALGRLVQLTRPDGLVVTSRREGDT
LITSETWPGGAALDVEQQVYDAAGQLVSVSRNAGDHWVEQRYAYAPSGKVRDVTLPGGAH
VAFTLDLLGRVFAQQSPDTGRTVFLLDASDNQRARTNAAGQIVRTEVDAMNRATNVYHDA
EPAPRVRYEYADASGAPPADGIVANRYTRLWRITDEIGTVDFEYDEAGRKTATTRTVAAT
GQRFVTRRAYDALGRLARATLPASAPGGAARTIAYGYAADGRLVSASGVVKDAAYDRFGR
LSSIDYENGASTLIDYAANASGIARVRVLDAARNVLRDTTLTRGGGLVQTLASAHAGDDS
VDFGYDPLRRLTSAHYRQGATAADAHDWTFDDAFNATAATDAGVLTYEPGTHRLASVGGA
AAAFDAAGRMTSGRFGAATFDAADHLSAVTLPDATHIAHTYDYQGRRVRSTKNGAQTYFS
PIEDIEFQGDTAIVWITFGRQRIAADIGGALTFVHPNALGVMDLITDSGGAYGTRVRQTP
FGYARAADGAAPAGGVAAVALALGAADATGLVCHGLRWYDPRVGQFISPDPVVTSVYTVG
AWNPYVYCLGNPILLADPNGCSFLSVLEIIGVAILAAACVVGAIFTGGATLVALGVLSAN
IGGWLLAGVALGSLGGAIAGELAAQKAGGNLWAGAFLGAFLGGATSLIGGALGGAAAAGI
DTLIGGTKTFLSFVAAGAIQGTLAGAGTGLAIGYAGGKGNAESMLIAMAKGAAWGAVLGT
LLGAGIGAIAGTGISGAAKPDNFLNIGAFGQKFADFTSTSTAINSADNAAGVTESLAQLS
MPNGFNAGNLLGLLPNLVTTNEQAAGWFSIPIGWLGPGVLNDAGFAGLVDTSMALDQAGF
SYAHQISLLLGAAPYFIDYAATMAQIVDANGVNNFEMAFNNAFGSGSPSNTG
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagacaagcggtaccgccgacgagatcctgaacctgccttcgggcggcggatcg
gtcagtggcgatggcggcgatttcagcgtcgatctgaacacgggcaccgcgacgctgaag
ttcgatctgacggtgccggccggcccgaacggcatcacgccgccgcacacgctgcagtat
tcggcgggcgcgggcgacggagcgttcggcatcggctggtcgctcgggctgatgacgatc
cgccgcaggatcacgccggcaacgggcgcggccgagcccgcgccgcccggcgcgtgctcg
ctcgtcggcgtcggcgagctcgtcgacatgggcgcgcgccgctttcggccgatcgtcgac
gcgacggggctgctgatcgagttcacgggcgcgtcgtggacggccaccgacaagaccgat
acgcagtacacgctcggcacgagcgcgaacgcacggatcggcggcggcggcgcgctgccc
gccgcatggctcgtcgatcgctgcgccgacagcgcgggcaacgcgatcgcgtacacgtgg
ctcgacgtcggcggcgcgcgcgtgccgcaggcgatcgcatggggcacgtatcggctcgac
ttcgtgtacgaggcgcggcccgacgtgctcgtcgacggcagctacggcgcgcccgtcacg
ctcgacaagcgctgcgcccgcatcgagctgcacgcgacgaccgaggcgcccagcctcgtg
cgcagctggacgctgctgtacgacgacggcggcggccgcggccgctcgctgctcgcgacg
atccgcgagcaaggccacgcggccgacggctcgatcctcgccgcgcccgagcgcacgttc
gcgtactcgtcgcccggcgcgcccgcgctcgtgccggtgacgggctggacgacgccgctg
tcggacccgaacaccgatctcgtcgacctgaacggcgacgggctgcccgacatcgtgcac
cttggccatggcatgccgacgatgcatccgaacctcggcggcggacagttcggcgcgccg
cgcccgctcgcgcgcaccgccgccccgttgcggctgtccgcgccctcggtcgcgttcgcg
gacatgtcgggcaacggcagcgtcgacgtgctcgtgctcgacgcgccgttctccggctac
tacccgctggccgcgccgggcggctcggcgcccgcgggcttcggccggccgatcgtgttc
gagcgcgcgcccgccgtctcgccgagcgacgtgcgactgcgcttcgtcgatctgaacggc
gacggcatcaccgacatcctgctcgacaccggccgcggctggctcgcgtatctgcgcgac
ggcccggcgagctggtccgacgcgccgcgcgtgctgccgcccgcgcgcacgccgcccgtg
tcgctcgccgatccgcacgtgcatctcgccgacatgacgggcgacgggctgatggacatc
gtgcgcgtgacgggcggcgggctcacgtactggcccgcgcgcgcggacggcggctgggac
gcggcgatcgcgatgacgccttcgcccgcgttcgggcgcgatttcgatccgcaccggctc
gcgctgtacgacgtcgacggcgacggctgcgcggatctcgtctacgtcggcctgcaatcc
gtcacgctgtggcgcaacgtcggcgcgacgcggctcgccgcgcccgtggcgattcccggc
acgccggtcgcgctgccgggcagctaccggatcgtcgatctgctcggctcgggcacggcg
ggcgtgcatttccaactgccgtcgatcgcgggcgcgtcgcgccagagctatctcgatctc
ggcggcggcgtgaagccgtatctgctgaccgatctcgcgcacggcgcggcgcaaagcacg
catatcggctaccgcacgagcaccgagtacgcgcgcgacgacgcgcaagccggcgcgccg
tggcgaacctatcatccgtttccgatccagtgcgtcgcgcgcaccgaccagaccgaccac
ggcaccggcgcgacgacgtcgacccgctacgcgtatcacgacgcgcgctacgatcccgcg
acgcgcacgttcctcggcttcggccgcgtcgacagcgagcaactgggcgacgcgtcgtgc
ccgacgctgcgcgtcgagacgaccttccacctcgggctcgatccggccgacccggcccgc
ccgctgacgggcgacgaagcgctgaagctcggcgcgctgcgccgcaagccgctcgtcacc
gcgacgtacgggctcgacggctcgccgctcgagcaccgcccgtattcgatcacgcggcac
gcgtacgacgcgctgctcgtcgcgtcgacggcggataacggcaagcggatcgcggtgccg
tactgcacgacgtcgaccgaggagcgctgggaacggcagagcgccgccgtatcggcacgc
accgtcgactatctcgcgatcacgagcgaaggcgacgtcacgtcgcaacgcacgcgcgcg
cagcgcgccggcatcgccgcgcccgaccaggacgtgacgacgacgacgacgctcgccacg
ggcggcaagaacctgagactgccggcgcgcgtcacgcagaccgcgcccggcggggacatc
gtgtccgaatcgatctgcttctacgatggcgacgcgttcgccggcttgcccgaaggccag
gcgacgcgcgggctcgtcacccgcatcgaagatcgcgtgttcgacgacgcgttcgtcgcg
tcggtctggggcgacaccccgcccgacctcacgcagtacggctaccaccggctgccgggc
gaagcgggcagttggtggaagacccggcgcgcgcacgcgcgcggcgcgaacgcgagcggg
ccgacgctcgcgacgaaaggcccgctcggcgcgctgcagacgctgcaatacgacgcgagc
agccagcgcgtcgtcaaggtgatcgacgcgctcggcaacgcggtggcggccaccaccgat
gcgcgcgtgttccagaccgcctcgctcaccgatgcgaacggccaccggacggccgacgcg
ttcgacgcgctcggccgcgtcgtcgcgacgatcggcccgctcgacacgcccgcgctgccg
acgatcgcgttcacgtacacggtgggcgcgatctcgaccgtcacgagcgcgacgcgcggc
acgcacggcggcgcggacgcggtgccggcgctcacgtggatcgacggcaccggcaacgtg
ctcggcaagggcacgcccgccgccgcgcccggcgagtggaccgtcacccacgcggtgcgg
cgcaacgcgcgcggcctcgtcgccgcctcgttcctgccgtacgcggcgacgggcgcaaac
tggcagccgccgcccgcggacaccggcgcgacgacgtcgacctacgacgcgctcggccgg
ctcgtgcagctcacgcggccggacgggctcgtcgtcacgagccgccgcgaaggcgacacg
ctgatcacgagcgaaacctggccgggcggcgccgcgctcgacgtcgagcagcaggtgtac
gacgcggcgggccagctcgtatcggtctcgcgcaacgcgggcgatcactgggtcgagcag
cgctacgcgtacgcaccgtcgggcaaggtccgcgacgtgacgctgccgggcggcgcgcac
gtcgcgttcacgctcgacctgctcggccgcgtgttcgcgcagcaaagccccgacacgggc
cgcaccgtgttcctcctcgacgcatcggacaaccagcgcgcgcgcacgaacgcggcgggc
cagatcgtgcgcaccgaagtcgacgcgatgaaccgcgcgacgaacgtgtatcacgacgcg
gagccggcgccgcgcgtgcgctacgagtacgccgacgcgagcggcgcgccgcccgcggac
ggcatcgtcgcgaatcgctacacgcgcctctggcggatcaccgacgagatcggcacggtc
gacttcgaatacgacgaagccggccgcaagaccgcgacgacgcgcaccgtcgcggccacc
gggcagcgcttcgtcacgcggcgcgcatacgacgcgctcggccgcctcgcgcgcgcgacg
ctgcccgcgagcgcgccgggcggcgccgcacgcacgatcgcctacggctatgcggccgac
gggcggctcgtcagcgcatcgggcgtcgtgaaggacgcggcctatgatcggttcgggcgc
ctgagctcgatcgactacgagaacggcgcgtcgacgctgatcgactacgcggcgaacgcc
agcggcatcgcacgcgtgcgcgtgctcgacgccgcgcgcaacgtgctgcgcgacacgacg
ctcacccgcggcggcggcctcgtgcagacgctcgcgagcgcgcacgccggcgacgacagc
gtcgacttcggctacgacccgctgcgccgcctgacgagcgcgcactaccggcaaggcgcg
acggccgccgatgcgcacgactggaccttcgacgacgcattcaacgcgacggccgccacc
gatgcgggcgtgctgacgtacgagccgggcacgcaccggctcgcgtcggttggcggcgcg
gcggcggcgttcgatgccgccggccggatgacgagcgggcgcttcggcgcggcgacgttc
gacgcggccgatcacctgagcgccgtcacgctgccggacgcgacgcacatcgcgcacacg
tacgactaccagggccgccgcgtgcgctcgacgaagaacggcgcgcagacgtatttcagc
ccgatcgaagacatcgagttccagggcgacacggcgatcgtgtggatcacgttcggcaga
cagcggatcgcggccgacatcggcggcgcgctgacgttcgtgcatccgaacgcgctcggc
gtgatggatctcatcaccgattcgggcggcgcatacggcacgcgcgtgcggcagacaccg
ttcggctacgcgcgagcggccgacggcgcggcgccggcgggcggcgtcgcggcggtggcg
ctcgcgctgggcgcggcggacgcgacgggcctcgtatgccacggcctgcgatggtacgac
ccgcgcgtcggccagttcatcagcccggacccggtggtgacgagcgtctataccgtcggc
gcgtggaacccgtacgtgtactgcctcggcaatccgatcctgctcgccgatccgaacggc
tgcagcttcctgagcgtgctcgagatcatcggcgtcgcgatcctcgcggcggcctgcgtc
gtcggcgcgattttcacgggcggcgcgacgctcgtcgcgctcggcgtgctgtccgcgaac
atcggcggatggctgctcgcgggcgtggcgctcggcagcctcggcggcgcgatcgcgggc
gagctcgccgcgcagaaggcgggcggcaacctgtgggcgggcgcgttcctcggcgcattc
ctcggcggcgcgacctcgctgatcggcggcgcgctcggcggcgcggccgcggccggcatc
gacacactgatcggcggcacgaagacgttcctgtcgttcgtcgcggcgggcgcgatccag
ggcacgctcgcgggcgcgggcacggggctcgcgatcgggtacgcgggcggcaagggcaat
gccgaatcgatgttgatcgcgatggccaagggcgccgcatggggcgcggtgctcggcacg
ctgctcggcgcggggatcggcgcgatcgcgggcacgggcatcagcggcgcggcgaagccg
gacaacttcctgaacattggtgcgttcggccagaagttcgcggatttcacgagcacatcg
acggcgatcaactcggccgacaacgcggcgggcgtgaccgaatcgctcgcgcagctttcg
atgccgaacggtttcaacgcgggcaacctgctcggcctgctgccgaacctcgtgacgacg
aacgaacaggcggccggctggttctcgataccgatcggctggctcgggccgggcgtgctg
aacgacgcggggttcgcggggctcgtcgatacgtcgatggcgctcgaccaggcgggattc
agctacgcgcaccagatctcgctgctgctcggcgcggcgccctacttcatcgactacgcg
gcgacgatggcgcagatcgtcgatgcgaacggcgtgaacaacttcgagatggcgttcaac
aacgcgttcgggtcggggagcccgagcaatacggggtga
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