Burkholderia pseudomallei A79A: X996_1337
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Entry
X996_1337 CDS
T03498
Symbol
pcnB
Name
(GenBank) poly(A) polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bpso
Burkholderia pseudomallei A79A
Pathway
bpso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X996_1337 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpso03019
]
X996_1337 (pcnB)
Enzymes [BR:
bpso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
X996_1337 (pcnB)
Messenger RNA biogenesis [BR:
bpso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
X996_1337 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AIV97486
LinkDB
All DBs
Position
1:complement(1494681..1496228)
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AA seq
515 aa
AA seq
DB search
MIKKLIRKLLGQDARTAQDAPQDPAEPRSAAPAAPAGRAKPARGAAKQPRNGAPTIVHAD
VHGIDPALISKNAIRVTDTLQQAGFRAFIVGGAVRDLLLGIAPKDFDVATDATPTEVQRL
FRRARLIGRRFQIVHVQFGQELIEVSTFRALVDAPQEPPADAAPAKRLKRDELDRRTHAV
DASGRVLRDNVWGEQHEDAARRDFTINAMYYDPASQTVLDYHDGMADMRARLLRMIGDPA
TRYREDPVRMLRVVRFAAKLGFDIEEKTREPIKELADLINNVPAARLFDEMLKLLLSGHA
LACLKQLRKQGLHHGLLPLLDVVLEQPQGEKFVTLALNNTDARVRAGKPVSPGFLFATLL
WHDMRQRFEQYSADGEFPVPALQRAMDDVIDMQTEKLAIHKRYSADMREIWGLQLRLEKR
SGRSALRLLEHQRFRAGYDFLLLRCESGELDPAVGQWWTDFIDGDAATREALLTQGGSRD
KSPRKRRRRGGRSRRTADSAEGAEGAARGESDAND
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaaaaactcatccgcaagctgctcgggcaggacgcccgtacggcgcaagacgcg
ccgcaggacccggccgagccgcgctcggccgcgcccgccgccccggcgggccgcgcgaaa
cccgcgcgcggcgccgcgaagcaaccccgcaacggcgcgccgaccatcgtgcacgccgac
gtgcacgggatcgaccccgcgctcatctcgaaaaacgcgatccgcgtgaccgacacgctg
cagcaagccggctttcgcgcattcatcgtcggcggcgcggtgcgcgacctgctgctcggc
atcgcgccgaaggatttcgacgtcgcgaccgacgcgacgccaaccgaagtccagcgcctg
ttccgccgcgcgcggctgatcggccggcgcttccagatcgtccacgtgcagttcggccag
gagctgatcgaggtgtcgacgttccgcgcgctcgtcgacgcgccgcaggagccgcccgcc
gacgccgcgcccgcgaagcgcctgaagcgcgacgagctcgaccgccgcacgcatgcggtg
gacgcaagcgggcgcgtgctgcgcgacaacgtgtggggcgagcagcacgaggacgcggcg
cgccgcgatttcacgatcaacgcgatgtactacgatcccgcatcgcagaccgtgctcgat
taccacgacgggatggccgacatgcgcgcgcgcctgttgcgcatgatcggcgatccggcg
acgcgctaccgcgaagatccggtgcggatgctgcgcgtggtgcgcttcgcggcgaagctc
ggcttcgacatcgaggagaagacacgcgagccgatcaaggagctcgccgatctgatcaac
aacgtgccggccgcgcgcctgttcgacgagatgctcaagctcctgctgtcgggccacgcg
ctcgcgtgcctgaagcagttgcgcaagcaggggctgcaccacgggttgctgccgcttctc
gacgtcgtgctcgagcagccgcagggcgagaagttcgtcacgctcgcgctgaacaacacc
gacgcgcgcgtgcgcgcgggcaagccggtgtcgcccggcttcctgttcgcgacgctgctg
tggcacgacatgcgccagcgcttcgagcagtattcggccgacggcgagttcccggtgccc
gcgctgcagcgcgcgatggacgacgtgatcgacatgcagaccgagaagctcgcgatccac
aagcgctattcggccgacatgcgcgagatctgggggttgcagttgcgcctcgagaaacgc
agcggccgcagcgcgctgcggctgctggaacaccaaagattcagagcggggtatgatttc
ctcctgttacgctgcgaatccggcgagctcgatccggccgtcggacagtggtggacggat
ttcatcgacggcgacgccgcaacgcgcgaggcgctcctcacgcagggcggcagtcgggac
aagtcgccccgcaagcggcgccgccgcggcggacgcagccgccggacggccgacagcgcc
gagggcgcggaaggcgccgcgcgcggcgagtccgacgcgaacgactga
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