Burkholderia pseudomallei A79A: X996_2087
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Entry
X996_2087 CDS
T03498
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
bpso
Burkholderia pseudomallei A79A
Pathway
bpso00906
Carotenoid biosynthesis
bpso01100
Metabolic pathways
bpso01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bpso00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
X996_2087 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bpso01006
]
X996_2087 (hpnD)
Enzymes [BR:
bpso01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
X996_2087 (hpnD)
Prenyltransferases [BR:
bpso01006
]
Terpene biosynthesis
Squalene/phytoene synthase
X996_2087 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
tRNA-synt_His
RdRP_4
DUF4148
Motif
Other DBs
NCBI-ProteinID:
AIV97759
LinkDB
All DBs
Position
1:complement(2356179..2357021)
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AA seq
280 aa
AA seq
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MNFDEYCQQKAAPPGSSFYYALRQAPLARQPLVAALFALRRELEQTVKEVSDPTVGHTKL
AWWQKELAALASGHPSHPVSQALAAHHPDIARETDALRTLVAGYGMDLEQARYLDFANLR
RYADQTGGMFAALVASASASAGRPTANGARWAQPLGQALTLAQFVQDLGQDARQGRIYVP
IDELQRYGVTAADLLNRRYSPAYTELMRFQTSRARDALNASLSGIPADERRAQRTLRALG
ALALAVLDEIERDGFQVLHQRIALTPIRKLWIAWRAARRR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttcgacgaatactgccagcagaaagccgcgccgcccggctccagtttttactat
gcgctgcgccaggcgccgctcgcgcgccagccgctcgtcgccgcgctgttcgcgctgcgt
cgcgagctcgagcaaacggtgaaggaagtcagcgatccgaccgtcggccacaccaagctc
gcgtggtggcaaaaagagctcgccgcgctcgcatccggccatccgtcgcatccggtgtcg
caagcgctcgccgcgcatcatccggacatcgcgcgcgaaaccgatgcgctgcgcacgctc
gtcgccggttacggaatggacctcgagcaggcgcgctatctggacttcgcgaacctgcgc
cgttacgccgatcaaacgggcggcatgttcgccgcgctcgtcgcaagcgccagcgccagc
gccggccggcccaccgcgaacggcgcgcgctgggcgcagccgctcggccaggcgctcacg
ctcgcgcaattcgtgcaggatctcgggcaggatgcgcggcagggccgcatctacgtgccg
atcgacgagttgcaacgctatggcgtgacggccgccgatctcctcaaccgccgctacagc
cccgcctacaccgagctgatgcgcttccagacgtcacgcgcgcgcgacgcactcaacgcg
tcgctatccggcattcccgccgacgagcggcgcgcgcagcgcacgctgcgcgcgctcggc
gcgctcgcgctcgcggtgctcgacgagatcgagcgcgacggctttcaggtgctgcatcag
cggatcgcgctcacgccgatccgcaagctgtggatcgcatggcgcgccgcgcggcgccgc
tga
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