Burkholderia pseudomallei A79A: X996_2204
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Entry
X996_2204 CDS
T03498
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bpso
Burkholderia pseudomallei A79A
Pathway
bpso03030
DNA replication
bpso03430
Mismatch repair
bpso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
X996_2204 (dnaX)
03430 Mismatch repair
X996_2204 (dnaX)
03440 Homologous recombination
X996_2204 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpso03032
]
X996_2204 (dnaX)
03400 DNA repair and recombination proteins [BR:
bpso03400
]
X996_2204 (dnaX)
Enzymes [BR:
bpso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
X996_2204 (dnaX)
DNA replication proteins [BR:
bpso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
X996_2204 (dnaX)
DNA repair and recombination proteins [BR:
bpso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
X996_2204 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_14
AAA_22
AAA_16
AAA_5
AAA_18
DUF3646
TsaE
Mg_chelatase
AAA_assoc_2
AAA_2
Com_YlbF
Glyco_tranf_2_5
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AIV95848
LinkDB
All DBs
Position
1:2479896..2482364
Genome browser
AA seq
822 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLERILGEERIAFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTETAVSGM
LGTLDQTYMVRLLDALAAADGPQILAVADEMALRSLSFSAALQDLASLLHRIAWAQFAPA
SVLDEWPEAADLRRFAELLSPEQVQLYYQIATVGRGELGLAPDEYAGFTMTLLRMLAFEP
ATTGGGAPAGGVPARVAGAAPKSGARAAAAVGASAVPAVTGATGAALAPKAAAARAATRA
EAPPAAPARPATAERGDDASDGDAPVPAKANARASADSRCDERDAQPPADSGSASGAASS
APPDTAFESAPRAAAPSAATPAAVPDARAPAAASAEDAVEAAAPAAPESRPPTPAAGAPV
SRATGAAAALDVLRNAGMRVSSGRGAGAARPAAGPAASPTKPAPRVQVSVPTPRARAATG
DAPPNGAARAEARAESRGAPPPWEDIPPDDYVPLSMDDGFIPPDDGFVPVFDSGPDDVRV
APKPAPAPPVDTRPLPEPIPLDAIGYDGEWPTLAASLPLKGVAYQLAFNSELTTADGGTL
KLAVPVPQYADAAQVAKLKAALADALGKPVDVAVEVGPARRTAAALAAAERAKRQREAEQ
EMSADPFVQQLLREFGASIVEGSIRPVGAEAGAADGASPTLH
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaagtggcgtccgaaggatttcgcttcgctcgtcggc
caggagcacgtcgtcagggcgctcacgcacgcgctcgacggcgggcgtttgcatcacgcc
tatctattcacgggcacgcgcggcgtcggcaagacgacgctgtcgcgcatcttcgcgaaa
gcgctcaattgcgagacgggcgtcacgtcgcagccgtgcggcgtgtgccgcgcgtgtcgc
gaaatcgatgaagggcgcttcgtcgactatgtcgaaatggatgccgcgagcaatcgcggc
gtcgacgaaatggccgcgctgctcgagcgcgcggtgtacgcgcccgtcgatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaaccatgcgttcaacgcgatgctc
aagacgctcgaagagccgccgccgcacgtcaagttcatcctcgcgaccaccgatccgcag
aagattcccgtcaccgtgctgtcgcgctgcctgcagttcaatctgaagcagatgccggcc
gggcacatcgtgtcgcatctcgagcggattctcggtgaagagcgcatcgcgttcgagccg
caggcgctgcgtcttctcgcgcgcgcggcgcagggcagcatgcgcgatgcgctgtcgctg
accgatcaggcgatcgcgtattcggcgaacgaagtgacggaaaccgccgtgtccggcatg
ctcggcacgctcgaccagacctatatggtgcggctgctcgacgcgctcgccgcggccgac
ggcccgcagattctcgccgtggccgacgagatggcgctgcgcagcctgtcgttctcggcc
gcgctgcaggatctcgcgagcctgctgcaccggatcgcatgggcgcagttcgcgccggcg
tcagtgctcgacgaatggccggaggcggccgatctgcgccgcttcgccgaactgctgagc
ccggagcaggtgcaactctattatcagatcgcgacggtcgggcgcggcgagctcgggctc
gcgcccgacgaatacgcgggcttcacgatgacgctgttgcgcatgctcgcgttcgagccg
gcgacgacgggcggcggcgcgccggcaggcggggtgcctgctcgggtggcgggcgccgcg
ccgaagtcgggcgcgcgtgctgccgcggcggtcggcgcgtcggcggtgcccgcagttact
ggggctactggagcggcgcttgcgccgaaggcggctgccgctcgtgcggcaacgcgcgcc
gaggcgccgccggccgcgccggcgcggccggcgacggcggaacggggcgacgacgcatcc
gacggcgacgcgccggtgcccgcgaaggcgaacgcacgcgcatcggccgactcgcgttgc
gacgaacgcgacgcgcagccgcccgccgattcgggcagcgcgtcgggcgcggcatcgagt
gcgccgccggacaccgcgttcgaatccgcgccgcgagcggccgcgccgtccgcagcgacg
cccgccgccgtgcccgatgcgcgcgcgccggccgccgcctcggccgaggatgctgtcgag
gcggccgcgcccgccgcgcctgagtcacgcccgccgacgcccgccgccggcgcgcccgtg
tcgcgcgcgaccggcgcggccgccgcgctcgacgtgctgcgcaacgcgggcatgcgcgtg
tcgtccgggcgcggcgccggcgccgcgcgcccggccgccgggccggccgcgtcgccgacg
aagcccgcgccgcgcgtgcaggtatccgtgccgacgccgcgcgcccgcgcggcaaccggc
gacgcgccgccgaacggcgccgcgcgcgccgaagcgagagccgagtctcgcggcgcgccg
ccgccgtgggaggacatcccgcccgacgattacgtgccgttgtcgatggacgatggcttc
atcccgccggacgacggtttcgttccggtgttcgacagcgggcccgacgatgtccgcgtc
gcgccgaagccggcccccgcgccgcccgtcgacacgcgcccgctgccggagccgattccg
ctcgatgccatcggctacgacggcgaatggccgacgctcgcggcgagcctgccgctcaag
ggcgtcgcctatcagctcgcgttcaacagcgagttgacgacggccgacggcggcacgctg
aagctcgccgtgccggtgccgcaatatgcggacgccgcgcaggtcgcgaagctgaaggcg
gcgctcgcggatgcgctcggcaagccggtcgacgtcgcggtcgaggtcggcccggcgcgc
cgcaccgcggcggcgctcgccgccgccgagcgcgcgaagcgccagcgggaggccgagcag
gagatgagcgccgatccgttcgtccagcaattgctgcgcgaattcggcgcgagcatcgtc
gaaggctcgattcgacccgtcggcgccgaagcgggcgccgcggacggcgcctcgccgacg
ctgcactga
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