Bifidobacterium pseudolongum: AH67_01570
Help
Entry
AH67_01570 CDS
T03529
Name
(GenBank) ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bpsp
Bifidobacterium pseudolongum
Pathway
bpsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AH67_01570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpsp03019
]
AH67_01570
03009 Ribosome biogenesis [BR:
bpsp03009
]
AH67_01570
Enzymes [BR:
bpsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AH67_01570
Messenger RNA biogenesis [BR:
bpsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AH67_01570
Ribosome biogenesis [BR:
bpsp03009
]
Prokaryotic type
rRNA processing factors
AH67_01570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AIZ15789
UniProt:
A0A0A7IAE6
LinkDB
All DBs
Position
364390..367647
Genome browser
AA seq
1085 aa
AA seq
DB search
MPEQTEQGFEPLETASNTDSSSANEQPAAPRRRRTGRRVVRGAGAAGATVELKVEEHGPL
FKEPPTALPASKPVHALTAAPAAESSAEGESSPDEAAAEQAEPARKTTRSRRRSTASETT
EATETPRRTRRRSTKAAAADEGADAGEHASEPAEEPARTTRRRRRAAAAPEPSEESRTTD
ALDSLDGDAQAEPEEHEVHQSRRHHAAARPMTSLLFQEPVIPQRPKHADDETDETDESNE
SSDEHTTRRRRRTRGRKGDESAEATKPAAGESRRGRRRTPVDYDADFDDVEDINESTSRR
RSNRRMNAQERRAAAEVEQIEEDLVLDDITYAPIDEAIARNAKRKRKHENDEEAEAIVEA
DLNSGSEEGEDGEPTVRRRRRRRRADHEAAEEQQNEETAESSSEDDEETTVTRRRRRRRN
GKNAEEETTTRRSRKQQYIDEIADVEGSTRLEAKKQRRRDNRRERSRQNQLLEQDFLARR
ENVDRLMVVRQRDRHTQISVLEDNVLVEHYVSDIQEVATVGNIYLGRVQNVLPSMEAAFV
DIGQARNGVLYAGEVNWDSTRLDGQPRRIELAFRSGDPVLVQVTKDPIGHKGARLTSQVT
LAGRFLVLVPSGGMTGVSRKLSSRERSRLKSIVSKIAPKDMGVIIRTAAEGASEEAITKD
LEMLLHQWEQIQAKREEFKHGKRPKLLQGEPDMAIRVVRDIFNDDFRKMIVEGDGVYTRI
EEYLETMAPDLREKLEKWDPAEHEGKDVFDKWQIDSQLRKGMERQVYLPSGGSIVIDRTE
AMTTIDVNTGRFIGKGKSLEETVTRCNLEASEEIARQLRLRDIGGMIMIDYVDMVMPSNR
DLVLRRLLECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPACKGRGFIVHD
EPTISKEYDDPYALKGGDPFIKTNKHGHGTEAHAVHAPKGSSAAVKAKLAQIAAAAVAAN
NAEEEAEAAAKQAEELEVQIERIEETVEAEHIKATEAAVDAEGDAEVAAAAEESAESEGA
ETAEPTVEPEAAETADETVMDASDANAEEAAAAQPATKSVAEEAESQPDAESTEHSSESE
AETAE
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaacagacagaacagggtttcgagccactcgaaaccgcatcgaataccgattcc
tcatcagccaacgagcagccggccgcaccgcgccgccgccgtacaggccgccgcgtggtg
cgcggggccggtgccgccggcgccacggtggagctcaaagtggaggagcacggcccgctc
ttcaaggagccgcccaccgcgctgcccgcgtcgaagccggtgcacgcgctgaccgcggcg
cccgccgccgagtcttcggctgagggcgagtcgtcgccggacgaagccgccgccgagcag
gccgagcccgcgcgcaagacgacgcgctcgcgccgccgttccactgccagcgaaaccacc
gaagcgaccgagacaccgcgccgcacgcgtcgccgcagcaccaaggccgccgcggccgat
gagggcgccgatgccggtgagcacgcgagcgagccggccgaggaaccggcgcgcaccacg
cgacgccgtcgccgcgcggccgctgcgccggaaccgagcgaggagagccgcacaaccgac
gcgcttgattcgcttgacggtgacgcacaggccgaacccgaggagcatgaggtgcatcag
tcgcgccgccaccatgcggcggcccgacccatgacgtcgctgctgttccaggagcccgtc
atcccgcagcgccccaagcacgccgacgacgagacggacgaaaccgacgaatccaacgaa
tcatccgacgagcacaccacgcgccgtcgccggcgcactcgcggccgcaagggcgacgag
tcggccgaggccaccaagccggcagccggcgaatcgcgccgtggccgccgccgtacgccg
gtcgattatgacgccgatttcgacgacgtggaagacatcaacgagtccacgtcgcgccga
cgctccaaccgccgcatgaacgcgcaggagcgccgcgccgccgccgaagtggagcagatc
gaagaggatctggtgcttgacgacatcacgtatgcgccgatcgacgaggcgatcgcccgc
aacgccaagcgcaagcgcaagcatgaaaacgacgaagaggccgaggccatcgtggaagcg
gacctcaacagcggcagcgaggagggcgaggacggcgagccgaccgtgcgccgtcgccgc
cgtcggcgccgcgccgaccacgaggccgccgaggagcagcagaacgaggagaccgccgag
tccagctccgaagacgacgaggagactacggtcacgcgccgccgtcgccgccgccgcaac
ggcaagaacgcggaggaggagaccacaacccgccgctcgcgcaagcagcagtacatcgac
gaaatcgccgatgtggagggctccacgcgtctcgaggcgaagaagcagcgccgccgcgac
aaccgccgcgagcgcagccgtcagaaccagctgctcgagcaggacttcctggcgcgccgc
gaaaacgtggaccgcctgatggtggtgcgccagcgagaccgccacacgcagatctccgtg
cttgaagacaacgtgctcgtggagcattacgtctccgacatccaggaagtcgccacggtg
ggcaacatctatctgggccgcgtgcagaacgtgctgccgagcatggaagccgcgttcgtc
gacatcggccaggcgcgcaacggcgtgctgtatgcgggtgaggtgaactgggattccacg
cgcctcgacggccagccacgtcgcatcgaactcgcgttccgctccggcgacccggtgctc
gtgcaggtcaccaaggacccgatcggccacaagggtgcgcgcctgacgagccaagtgacg
ctcgccggccgctttctggtgctcgtgccgtccggtggcatgaccggtgtgagccgcaag
ctcagcagccgtgagcgcagccgtctcaagtcgatcgtctcgaagatcgcgcccaaggac
atgggtgtgatcatccgcaccgcggctgagggggcctcggaggaggcgatcaccaaggat
ctggagatgctgctgcaccagtgggagcagatccaggccaagcgtgaggagttcaagcac
ggcaagcgccccaagctcctgcagggcgagccggacatggcgatccgcgtggtgcgcgat
atcttcaacgacgacttccgcaagatgatcgtggagggcgatggcgtgtacacgcgcatc
gaggaatacctcgagaccatggcccccgacctgcgcgagaagctcgagaagtgggacccg
gccgagcatgagggcaaggatgtgttcgacaagtggcagatcgactcgcagctgcgcaag
ggcatggaacgccaagtgtacctgccgagcggcggctccattgtgatcgaccgcaccgag
gccatgaccacgatcgacgtgaacaccggccgcttcatcggcaagggcaagtcgcttgag
gagaccgtgacgcgctgcaaccttgaggcgagcgaggagatcgcgcgccagctgcgtttg
cgcgacatcggcggcatgatcatgatcgattacgtggatatggtcatgccctccaaccgc
gacctcgtgttgcgccgcctgctcgaatgcctggcgcgcgaccgcaccaagcaccaggtg
gccgaggtcacgtcgctgggcttggtgcagatgacgcgcaagcgcatcggtcaggggctt
gtggaggcgttctccgaggaatgcccggcgtgcaagggccgtgggttcattgtgcacgac
gagcccacgatctccaaggagtacgacgacccctacgcgctcaagggcggcgatccgttc
atcaagacgaacaagcatggccacggcacggaagcccatgcggtgcatgcgcccaagggc
tcatccgccgcagtgaaggcgaagctcgcgcagattgccgccgcggccgtggcggcgaac
aacgccgaggaggaagcggaggccgcagccaagcaggccgaggagctcgaagtgcagatc
gaacgcatcgaggaaaccgtcgaagccgagcatatcaaggccactgaggccgctgtggac
gccgaaggcgatgccgaggttgccgcggccgccgaggaatcagcagagtctgagggcgct
gagaccgctgagcccacggtggagccggaagccgcggaaaccgcagatgaaacggttatg
gatgcttctgatgccaacgccgaggaagcggcagcagcacagccggccaccaaatccgta
gccgaggaagcggaatcgcagccggatgcggaatccaccgagcattcgtccgaatccgag
gccgaaaccgccgagtaa
DBGET
integrated database retrieval system
