KEGG   Bifidobacterium pseudolongum: AH67_02950
Entry
AH67_02950        CDS       T03529                                 
Name
(GenBank) ATP-dependent endonuclease
  KO
K15255  ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
Organism
bpsp  Bifidobacterium pseudolongum
Brite
KEGG Orthology (KO) [BR:bpsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpsp03032]
    AH67_02950
   03029 Mitochondrial biogenesis [BR:bpsp03029]
    AH67_02950
Enzymes [BR:bpsp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     AH67_02950
DNA replication proteins [BR:bpsp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    AH67_02950
Mitochondrial biogenesis [BR:bpsp03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    AH67_02950
SSDB
Motif
Pfam: PIF1 AAA_30 AAA_19 AAA_22 Pif1_2B_dom AAA_16 Viral_helicase1 NTPase_1 AAA_5 DEAD AAA_24 SH3_13 MeaB AAA nSTAND3 AAA_25 AAA_14 SLFN-g3_helicase IstB_IS21 NAT10_TcmA_helicase TrwB_AAD_bind UvrD_C_2 KdpD cobW AAA_28 NPHP3_N Zeta_toxin Herpes_Helicase Sigma54_activ_2 ABC_tran AAA_7
Other DBs
NCBI-ProteinID: AIZ16008
UniProt: A0A0A7I702
LinkDB
Position
673283..674689
AA seq 468 aa
MRQSEALGIMEAGANVFLTGAPGAGKTYTLNEFIHHARTHGTSVAVTASTGIAATHINGQ
TIHAWSGAGVATALTDQLIKLIRSRRRTKLNAADVLVIDEVSMMHAWLFDMVDQICRIVR
RDSRPFGGLQVVCSGDFFQLPPVSVSSRNHDVITPSPEYLASRERYARAGRNPEGFITES
FAWSELDPVICYLDEQHRQDDGQLLRVLTDIRQGCVSQQDRDVLVTRLGAQPPQGKQAVH
LFPSNQQADRLNSDRLQRIDAEEHSFEAQTAGPANLVERLERNMLAPKHLVLKAGAEVMA
VRNDPDHQYVNGSLGTVRGFANENKGGWPIVEFENGNIVTMNPASWQMMDGETVLAEVAQ
VPLRCAWAITIHKSQGMTLDSAVMDLKRTFAPGMGYVALSRVERLDGLYLTGVNERMFLM
SDDAIRLDGDLRAKSAAAVRQLQRDGAESFVQQQRAREEDEFVQDELF
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgcggcagtccgaagcgctgggcatcatggaggccggtgccaacgtgttcctcaccggt
gcgccgggcgcgggcaaaacctatacgctcaacgagttcatccaccatgcgcgcacacac
ggcacgtcggtcgccgtcacggcgagcaccggcatcgccgccacacatatcaacgggcag
acgatccacgcatggagcggagcgggcgtggcgaccgcgctcaccgaccagctcatcaaa
ctcatccgcagccgccggcgcaccaaactcaacgcggcggacgtgctcgtgatcgacgag
gtctcgatgatgcacgcgtggctgttcgacatggtcgaccagatctgccgcatcgtacgg
cgcgacagccggccgttcggcggcctgcaagtggtgtgttcgggtgatttcttccaactg
ccgccggtcagcgtctcgtcgcgcaaccacgacgtgatcaccccgagccccgaatatctg
gcctcgcgcgagcgctatgcgcgtgcgggccgcaacccggaggggttcatcaccgaatcg
ttcgcgtggagcgagctcgacccggtgatctgctacctcgacgaacagcaccgacaggac
gacggccagctgctgcgcgtcctcaccgacatccgccaaggctgcgtaagccaacaggac
cgcgacgtgctcgtcacgcgcctcggcgcccaaccgccgcaaggcaagcaggccgtgcac
ctctttcccagcaaccagcaggcggaccgcctcaacagcgaccgcctgcagcgcatcgac
gctgaggaacacagtttcgaggcgcagacagccgggccggcgaacctcgtggagcggctc
gaacgcaacatgctcgcgccgaagcacctcgtgctcaaagccggcgccgaagtgatggcc
gtgcgcaacgaccccgaccaccagtacgtcaacgggtcgctcggcaccgtgcgcggattc
gccaatgagaacaagggcggctggcccatcgtcgaattcgagaacggcaacatcgtgacg
atgaacccggcctcgtggcagatgatggacggagagaccgtgctcgccgaagtcgcgcag
gtgccgctgcggtgcgcgtgggccatcacaatccacaaatcgcaaggcatgacgctcgat
tcggcggtcatggacctcaagcgcacgttcgcacccggcatgggctacgtggcgctttcg
cgcgtggagcggctcgacggcctgtatctgaccggtgtgaacgaacgcatgttcctcatg
agcgacgacgcgatccggctcgacggtgatctgcgcgccaagtcggccgcggcggtgcgg
cagctgcagcgcgacggcgccgagtctttcgtgcagcagcagcgcgcccgcgaagaggac
gagttcgtgcaggacgagctgttctag

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