Bifidobacterium pseudolongum: AH67_03075
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Entry
AH67_03075 CDS
T03529
Name
(GenBank) RNA helicase
Organism
bpsp
Bifidobacterium pseudolongum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3427
ResIII
Helicase_C
PLDc_2
SWI2_SNF2
DEAD
AAA_22
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
AIZ16030
UniProt:
A0A0A7I9Z2
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All DBs
Position
696374..699496
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AA seq
1040 aa
AA seq
DB search
MNSWASEVIAEPRDMQKTGDESIIDGVMSGLIRQNDTAEERFVPKLISNQPGSTMGDAIR
EELKGSESFDISVAFVSENALKSMYQAFVDHAKKSRKRNRIITSTKNYFNSPKAFKELMK
LQRDANMEVLIWEHGDSGESGGTIAQDQLFHPKGYLFTRRMEEGRAYYNLYVGSSNLTSF
ALQNQREWNLRVSSTSEAQLIQQVKEELADQVRQSVPLTDEWLAQYEEEFKNYAPPRAQI
LHQARAAKIEPNAMQRDALASIRQLRDEGQRRAIVISATGTGKTYLSAFDVREFHPKRML
YVANRDTILKAARESYQRVLGCDEAELGLLTGSSKQHDAKYVFASVDTLRRHMEEWYESD
DFDYVLIDEAHHSGANNYRSVIDYFSEARFMLGMTATPERTDSFDIFALFDHNIAYEIRL
QKALDENMLCPFHYYGVHEFLGDDGARVDSAEGISKSDKRQIQYSLEELTEPSRVRYIIR
KLEQYGSYGQQVTGLVFCSRIDEAEQLSHLFNQETNQQAERPYRTVAISGKTSPKDVENA
VNRLEAGELDYIFTVDKFNEGIDIPAINQIVMLRNTESSIVFTQQLGRGLRKFPHKTCVT
VIDFIGNYANNYLIPVALYGNAGDSDIVRKNLQREAVGLSSISFDEISRKQVLKSLDTAS
WSDKKMLREQYSVMRNELGRIPMLTDVYRHDPSMVMTMAQKNSSYFDFAREAETVLSDEE
RGSGFAHTLLPVDAQGEQWLKMATEILLVAIRPQELVVLDELLTSCNKGVYSPISVLRLK
EAVATRFPASYHTDAQFESALRVLDWSFFDTAAKKSYGECAVIERSDGGISLAPEFAARL
VNNDTFRRFFVDNVRTGLKRFADLLEESAKTGHSLQDDRGFVYEHRYKMFEVERLLAWPK
QINGSSVGGYLLPKEGGSMPVFVKYANSQYADRFLNPQEMHWFSKDKRSFKSREIEWMAQ
GQGDADWGATHFIPLFVMRKADAEKLKMYYYVGRVGSCANMRETARDNSGETVRLVEMDL
RLTKPLSAELYQHLTGQIDA
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgaatagttgggcgtctgaggtgattgccgaaccgcgcgacatgcagaagaccggcgat
gagagcatcatcgacggtgtgatgagcgggttgataaggcaaaacgacactgctgaggaa
cgatttgtgcccaagctgatttccaatcagcccggaagcacgatgggggatgccatccgt
gaggaattgaagggcagcgaatcttttgacatttcggtggcattcgtcagtgaaaacgca
ttgaaatcgatgtatcaggcattcgttgatcatgcgaagaaaagcaggaaacgtaaccgg
atcattacctccaccaaaaactatttcaacagtcccaaggcattcaaggaactgatgaaa
ctccaacgcgacgccaatatggaggttctgatttgggaacacggcgacagtggggaatca
ggggggacgattgctcaagatcaactatttcatcccaaagggtatctcttcaccagacgc
atggaagagggaagagcttattacaatctgtatgtcggcagttcgaacctcacgtccttt
gcgttgcagaatcagcgtgaatggaatcttcgtgtgtcttcgaccagtgaggcgcagctg
attcagcaggtcaaagaggaattggcggatcaagtcaggcaatcggtcccgttgactgat
gaatggttagcgcagtacgaggaggagttcaagaactacgcacctccgcgcgcgcaaatc
ctccatcaggcacgtgcggcgaaaatcgaaccaaatgcaatgcagcgcgacgcattagca
agcattcgacagttgcgtgacgagggacagcgtcgtgccatcgtcatctccgcaactggt
acgggcaaaacctacctttctgcattcgacgtacgcgagttccaccccaaacgcatgctg
tatgtagccaaccgtgacacgatcctcaaggccgcacgcgaatcataccagcgggtgctc
ggctgtgatgaggccgaactcggcttgctcaccggcagcagtaaacaacacgatgccaag
tatgtgttcgcatcggtagacacacttcgccgtcatatggaggaatggtacgagtccgac
gacttcgattacgtgcttatcgatgaggctcatcattctggtgcgaacaactatcgttcg
gtcattgattatttctcagaagcccgcttcatgcttggtatgacagcaactccagaacga
acggatagtttcgacattttcgcattgttcgaccacaacatcgcgtatgaaatccgcctg
caaaaagcgcttgacgagaacatgctgtgcccattccattactatggcgtgcacgaattc
ctgggagatgacggggcacgagtcgattcagccgaaggtatctcgaagagcgacaagcgg
cagattcaatactctcttgaagaattgactgaaccgagtcgcgtgcgatacatcatccgc
aagctcgagcaatatgggtcttacggccaacaagtgactgggctggtgttctgctccagg
attgacgaggcagagcagttgtcccatctgttcaatcaggaaaccaatcaacaggctgaa
cgcccgtatcgaacagttgccatcagcggcaaaacctcgccgaaagatgtagagaacgca
gtgaaccggcttgaagcgggcgaactcgactacatcttcactgtcgataaattcaatgaa
ggtattgatatccctgcaatcaaccagattgtgatgttgcgcaacaccgaatccagcatc
gtgttcacgcagcagttgggccgaggtctgcgcaagttcccgcacaagacatgtgttacg
gtcatcgatttcataggcaactatgcgaataactatctcattcctgttgccttgtatgga
aatgcaggcgacagcgatatcgtccgtaagaatttgcaacgcgaagctgtggggttgtcc
tcaatcagtttcgatgagatctcacgcaagcaggtattgaaatcattggatacagcgtcg
tggtcggataagaagatgcttcgcgaacagtattccgtgatgcgcaatgagcttggtcgc
attccgatgttgacagatgtataccggcatgatccgtcgatggtgatgacgatggcgcag
aaaaacagcagctacttcgactttgcacgcgaggcggagactgtgttgtccgatgaggag
cggggcagtgggttcgcgcatacgttgttgcctgttgacgcacagggcgaacaatggctc
aaaatggccactgagattcttttggttgccatccgcccgcaggaattggtggttctcgat
gaattgctcacatcatgtaataagggcgtctattcgccgatatcagtgttacgtctgaag
gaagcggttgcaacccgattcccagcctcgtaccatacggacgcccagtttgaatcggcg
ctcagggtattggattggtcattcttcgacacggctgccaagaagtcctatggggaatgt
gcggttatcgagcgtagtgatggagggatcagcctcgctcctgagtttgctgcgaggctc
gtgaacaatgacacgttccgccgcttcttcgtggacaatgtacgcacggggttgaaacgg
tttgcggatcttctcgaggaatccgctaaaactgggcattcgctgcaggatgaccgagga
ttcgtctatgaacaccgatacaagatgttcgaagtggaacgcctgcttgcatggcccaag
caaatcaacggcagcagcgtcggcggctatctgctccccaaagagggcggcagcatgccc
gtgttcgtcaaatacgcgaacagccaatacgctgaccgcttcctcaatccgcaggagatg
cactggttcagcaaggacaaacgcagtttcaaatcgcgtgagatcgaatggatggcgcaa
gggcagggagatgcggattggggtgcgacgcatttcatcccattgtttgtcatgcgcaag
gccgacgctgaaaaactcaagatgtactactacgtcggccgcgtcggctcatgtgcgaac
atgcgtgagacggcacgcgacaacagtggcgaaacggtcaggctcgtggagatggatctg
cgtctcacgaagccgttgagcgcggagctgtaccagcatctcactggtcaaatcgatgca
tga
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