Bifidobacterium pseudolongum: AH67_05040
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Entry
AH67_05040 CDS
T03529
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpsp
Bifidobacterium pseudolongum
Pathway
bpsp03420
Nucleotide excision repair
bpsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AH67_05040
03430 Mismatch repair
AH67_05040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpsp03400
]
AH67_05040
Enzymes [BR:
bpsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AH67_05040
DNA repair and recombination proteins [BR:
bpsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AH67_05040
MMR (mismatch excision repair)
Other MMR factors
AH67_05040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
DUF8172
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AIZ16374
UniProt:
A0A0A7IC52
LinkDB
All DBs
Position
complement(1135222..1137750)
Genome browser
AA seq
842 aa
AA seq
DB search
MQQDPDVIARPPEALIGDLNPQQAEAVQYRGPALLIGAGAGSGKTRVLTRRIAWILTQFG
AWPSQVLAITFTNKAAAEMRERLESLIGPVASRMWVSTFHSACVRILRRDGERIGLKSGF
TIYDTADCERLIKLIANDFNFDVKRYTPRSILARISDYKNNLTSAREMLAQYAPDFKPGQ
RGYRVGRIGNPEELYAVVYAEYQHRLAAANAVDFDDLIVRTVELLRACPDVAEYYHRKFR
YILVDEYQDTNHAQYVLIRELAGVDAGGHADMGAVGAGRVGPAWITVVGDSDQSIYAFRG
ADIRNIQDFEQDFPNAKTIMLEQNYRSTQTILDAANAVIAHNEGRKPKRLWTAAGAGEQI
TAYAADTAQLEAHWIAAQIKRLHTDDGVRYSDIAVMYRANAQSRSLEEGLIQARVPYQLI
GGTKFYERREVKDALAYLQAIVNPADDINMRRILNVPKRGLGARAESQVTLHAQQIGGTF
WDGVAHADQIEGMTARTLNPLMRFAQMMQELREFAQEHDAKPSQIVAEVLERSGLLEELK
KSQDPQDQSRVENLSQLQSVAAEYEQNTPDATLAGFLETTALVADSDQLPDESQDSGKVT
LMTLHTAKGLEYPIVFLTGMEQGTFPHARAMEDTSELSEERRLAYVGITRAKRHLFVTRA
AVRAQWGRSAEMMPSQFLDEIPADLIDWKRKEAGMERMRSGWRANASHDFGAHGGWNDDE
FDAPSSFGGSSYGSRSSYGSGSSYGSRSTYGSGVRGSAAHAGKVTTRRAPVRQPAQPASS
LKTDNHLRIEDFAVGDKVTHDKFGLGTVVDAQDKGRNSVITVDFGSSGVKRLMLRVAPIE
KL
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaagatcccgacgtcatcgcccgaccaccagaggcgctgattggcgatttgaac
ccacagcaggccgaagcggtccaataccgcggaccggccctgctcatcggcgcgggcgcg
ggctccggcaagacgcgcgtgctcacccgtcgcatcgcctggatcctcacacagttcggc
gcatggccgagccaagtgcttgcgatcaccttcaccaacaaggcggccgcggagatgcgc
gaacgtctcgaatcactcatcgggccggtcgcttcccgcatgtgggtctccacgttccat
tccgcgtgcgtgcgcatcctgcggcgcgacggcgagcgcatcggcctgaaatccggcttc
accatctacgacaccgccgactgcgagcgcctcatcaagctcatcgccaatgatttcaac
ttcgatgtgaagcgttatacgccccgctcgatccttgcgcggatctcggattacaagaac
aacctgacgagcgcgcgagagatgctcgcccagtatgcgcccgacttcaaacccgggcag
cgcggataccgtgtggggcgcatcggcaatccggaggagctgtatgcggtcgtctatgcg
gaataccagcatcggctcgccgccgcgaacgccgtggatttcgacgacctgatcgtacgc
acggtggagctgctgcgcgcctgcccagacgtcgcggagtactaccaccgcaaattccgc
tacatcctcgtggacgaataccaggacacgaaccatgcgcagtatgtgctcatccgtgag
ctcgcaggcgtggacgccggcggacacgcggacatgggcgccgtcggcgcggggcgcgtg
gggccggcgtggatcaccgtggtgggtgattccgaccagtccatctacgcgttccgcgga
gccgacatccgcaacattcaggatttcgaacaggattttcccaacgcgaagacgatcatg
ctcgaacagaactaccgttcgacgcagacgattctcgacgcggcgaacgcagtcatcgcg
cacaacgaggggcgcaagccgaagcgcctgtggaccgcggcgggcgcgggggagcagatc
accgcatacgccgcggacaccgcgcagctcgaagcacattggatcgccgcgcagatcaaa
cgcctgcacacggacgacggcgtgcgctacagcgacatcgccgtcatgtaccgtgcgaac
gcgcagtcgaggtcgctcgaagaggggctgatccaggcgcgcgtgccgtaccagctcatc
ggcggcacgaagttctacgagcggcgtgaggtgaaagacgcgctcgcctatctgcaggcg
atcgtgaacccggccgacgacatcaatatgcggcgcatcctcaacgtgcccaagcgcggc
cttggcgcgcgcgcggagtcgcaggtcaccctgcatgcccagcagatcgggggcacgttc
tgggacggcgtcgcgcacgcggaccagatcgaaggcatgacggcgcgcacgctgaacccg
ctcatgcgctttgcccagatgatgcaggaactgcgtgagttcgcccaagagcatgatgcg
aagccttcgcagatcgtggccgaggtgctcgaacgcagcgggctgctcgaggaactcaag
aagtcgcaggatccgcaggaccagtcgcgtgtggagaacctgtcgcagctgcagtccgtt
gccgccgaatacgagcagaacacgcctgacgcgacgctcgccgggttccttgagacgacg
gcgcttgtggccgactccgaccagctgcccgatgaatcgcaggattccggcaaggtgacg
ctgatgacgctgcacaccgccaagggcctcgaatacccgattgtgttcctgacgggcatg
gaacagggcacgttcccgcatgcacgcgccatggaagacaccagtgagctgtccgaggag
cgccgtctggcgtatgtgggcatcacgcgcgccaagcggcacttgttcgtcacgcgcgcc
gccgtacgtgcgcagtgggggcgttcggccgaaatgatgccgagtcagttcctcgacgag
atcccggccgacctgatcgactggaagcgcaaggaggctggcatggagcgcatgcgctcc
ggctggcgtgcgaacgcctcgcatgacttcggcgcgcatggcggctggaacgacgacgag
ttcgacgccccgagctcattcggcgggtcgtcatatggctcacgctcgtcgtacgggtcc
gggtcgtcgtacggatcacgttcgacctacgggtccggtgtacgtggctccgcggcgcat
gccggcaaggtcaccacacgccgggccccggtgcgccagccggcgcagcccgcgtcgtcg
ctgaagaccgacaaccacttgcgcatcgaggacttcgccgtcggcgacaaggtgacccac
gacaaattcggcttgggaacagtggtggacgcgcaggacaaggggcgcaactcggtgatt
accgtggacttcgggtcgagcggcgtcaagcggctcatgctgcgtgtggcaccgatcgaa
aagctctga
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