Bifidobacterium pseudolongum: AH67_05895
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Entry
AH67_05895 CDS
T03529
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bpsp
Bifidobacterium pseudolongum
Brite
KEGG Orthology (KO) [BR:
bpsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpsp03016
]
AH67_05895
Enzymes [BR:
bpsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AH67_05895
Transfer RNA biogenesis [BR:
bpsp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AH67_05895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AIZ16493
UniProt:
A0A0A7I8C7
LinkDB
All DBs
Position
complement(1313650..1314936)
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AA seq
428 aa
AA seq
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MNDEPVLLREPREGVPQVTDTLEGFEDYCDRLSAASGPLAADAERASGYRYGHDDWLIQF
KRDGAGIGLLDPMVLNAIGVDWGMFNRAVGDATWILHDAKQDLPGFAQLSLTPHALFDTE
IAARILGLHRFGLAYVTEHYLGMTLAKEHSAADWSYRPLPRDWRNYAALDVELLIPLAHK
MTIDLKRAGKWEWACQEFEYVLRTELHPRRPHAVPWLRISHINTIQRDRRALAIAKELWT
ERDELARRYDIAPSLLLADSSIIEAAQAKPHNARQFRAIRSLNERVRMHLGTDQDKMFER
YAPIQRKVKPSVWKQAIQRALELPEGELPVMPAPEGGATQVNAPKSMKLWQKHHPDRFRR
LQACRALINQVSQDTHTPPDVLIKPQIVRNLCWTDNPGARDVAGFLEEQGARPWQIHLLA
ASLTRGIM
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacgagcccgtgttgctgcgggaaccccgggaaggcgtcccacaggtgaccgac
accctggaaggcttcgaagactactgtgacaggctgtcagcggcgtccgggccgctcgcg
gccgacgccgagcgtgcgtcggggtaccgctacggccacgacgattggctcatccaattc
aaacgcgacggcgccggtatcggattgctcgacccgatggtgttgaacgcgatcggtgtg
gactggggcatgttcaaccgcgccgtcggtgacgccacatggatcctgcacgacgcgaag
caggaccttcccggcttcgcccagctctcgctcacaccccatgcgctgttcgacaccgag
atcgccgcgcgcatcctgggccttcatcgcttcggcctcgcctatgtgaccgagcattat
ctgggcatgacgcttgcgaaagagcactccgccgccgactggtcgtaccggccgctgccg
cgcgactggcgcaattacgcggcgctcgacgtggaactgctcatcccgctcgcgcacaag
atgacgattgacctcaaacgcgcgggcaaatgggaatgggcatgtcaggaattcgagtat
gtgctgcgcacggagctgcacccccggcgcccccatgcggtgccctggctgcgcatatcg
cacatcaacaccatccaacgcgaccgccgcgcactcgccatcgccaaggaactgtggacc
gaacgcgacgagctcgcccggcggtacgacatcgccccgagcctgctgctcgccgactcg
tcgatcatcgaagccgcacaggccaaaccgcacaacgccaggcagttccgtgccatccgc
tcgctcaacgagcgcgtgcgcatgcacttgggcaccgaccaggacaagatgttcgagcgg
tatgcgccgatccaacgcaaagtcaagccgagcgtgtggaagcaggccatccagcgcgcg
ctggaattgcccgagggcgaattgccggtcatgccagcgccggaagggggcgccacgcag
gtgaacgcgccgaaatccatgaaactctggcaaaagcaccatccggaccgcttcaggcgt
ctgcaggcgtgccgggcgctcatcaaccaggtctcgcaagacacgcatacgccgccggat
gtgctgatcaaaccgcagatcgtgcgcaacctgtgctggaccgacaacccgggcgcgcgc
gatgtggccggattccttgaggaacagggcgcccgcccatggcagattcatctgttggca
gcgtcgctgactcgcggtatcatgtaa
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