Bifidobacterium pseudolongum: AH67_05980
Help
Entry
AH67_05980 CDS
T03529
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bpsp
Bifidobacterium pseudolongum
Brite
KEGG Orthology (KO) [BR:
bpsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsp03032
]
AH67_05980
03400 DNA repair and recombination proteins [BR:
bpsp03400
]
AH67_05980
Enzymes [BR:
bpsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AH67_05980
DNA replication proteins [BR:
bpsp03032
]
Prokaryotic type
DNA Topoisomerases
AH67_05980
DNA repair and recombination proteins [BR:
bpsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AH67_05980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF4890
DUF3739
Inp1
Motif
Other DBs
NCBI-ProteinID:
AIZ16509
UniProt:
A0A0A7ICH4
LinkDB
All DBs
Position
1332485..1335148
Genome browser
AA seq
887 aa
AA seq
DB search
MVSRRKSQAAAAYDPRTVKEHIVETPLGEEMSKSFLEYAYSVIYARALPDARDGLKPVQR
RIIYQMGQMNLLPTRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLPLVDGH
GNFGSLDDGPAASRYTEARLAPAALGMNGDIDEDTVDFTPNYDNKLKEPEVLPAAIPNLL
VNGASGIAVGMATNMATHNLGEVVAAAKHVMRHPGAGLDELMQYVPGPDWPGGGIVIGRA
GIRDAYAQGRGSLTTRAATHVENVTARKKAIVVTELPYMVGPERVLERISEGVKNHKLEG
ISNAIDLTDRHNGTRIVIELKTGFDPAAVLSQLFKHTPLQENFTINNVALVDGRPHTMGL
REMLDVWIEHRRGVIRRRSEFRRAKALERLHLVVGLLLALVDIDEVIQVIRSSEDAETAK
TRLMQVFDLDEIQAQYILDLRLRRLTKMSRIELEAERDDLRRRIEELEAILASADSLDAV
VIREMDDAVAAYGSPRRTVLLDENEDGSLTPVKTHGDDSLADFAQSAALNAAKVSDAAAD
VAAAKKASDAGMTQALQIEDEPCVIALSATGLIGRMNPKAADAWRMRDPAAVQSGNDVIV
SMIHASTRSTYGLVTSAGRFVLAHAVELPSIAVTEPLSLAGGIDAAELVVSTEHTEPVDG
ERVIAAVAIPGEGEPLPLALGTRHGVVKRWNRESPTTMDSWSIIDLKDGDELLTAREAAD
GDRVVFVSSDSSLLTFDAKLVRPQGRTAAGMAGIRLAEGCTVLTCAIVPAAQVAWHEAQT
DDQGAVTEAAHGAVVLTVAGDADALPGTENGSAKLTPFSLYPTKGRATGGVRSQRFLKGQ
NTLVKAYVGDYPLVACTEHGHPVALPQPDMRRNGSGTELTAPITYVA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgcgtcgcaagtcgcaggcagcggcggcatatgatccgcgcacggtcaaggag
cacatcgtcgagacgccccttggcgaggagatgagcaaatcattcctcgaatacgcgtat
tcggtgatctacgcgcgcgccctacccgatgcgcgcgacggcctcaagcccgtgcagcgg
cgcatcatctaccagatgggccagatgaacctgctgcccacgcgtccatacatgaagtcc
gcacgtgtagtgggcgaggtcatgggcaagctgcacccgcacggcgactccgcgatctac
gaggccatggtgcgcctcgcgcagccgttcgcgatgcgcctgccgctcgtggacggccac
ggcaacttcggctcgctcgacgacgggccggcggcctcgcgttataccgaggcgcgtctt
gcgccggccgcgcttggcatgaacggcgacatcgacgaagacaccgtggacttcacaccg
aactacgacaacaagctcaaggaaccggaagtgctgcccgcggccatcccgaacctgctc
gtcaacggcgcctccggcatcgccgtcggcatggccaccaacatggccacccataacctc
ggcgaggtcgtggccgccgccaagcatgtgatgcgccatccaggcgccggtctcgacgag
ctgatgcagtatgtaccgggtccggattggcccggcggcggcatcgtgatcggccgcgcc
ggcatccgcgacgcctatgcgcagggccgcggctcgctcaccacgcgcgcggcgacgcat
gtggaaaatgtgacggcccgcaagaaggcgatcgtcgtgaccgaactgccgtacatggtg
ggccctgagcgcgtgctcgagcgcatttcggaaggcgtgaagaaccataagctcgaaggc
atctccaatgcgatcgacctgaccgaccgccacaacggcacgcgcatcgtgatcgaattg
aagaccggcttcgacccggccgccgtgctcagccagctgttcaagcacacgccgctgcag
gagaacttcacgatcaacaatgtggcgcttgtggacggccgcccgcacacgatgggcctg
cgcgagatgcttgatgtgtggatcgagcaccgccgcggcgtgatccgccggcgcagcgaa
ttcaggcgcgccaaggcgctcgaacggctgcaccttgtggtgggcctgctgctcgcgctt
gtggacatcgacgaggtcatccaggtgatccgctcgtccgaagacgccgagacggcgaag
acacgactgatgcaggtgttcgacctcgacgagatccaggcgcagtacatcctggatctg
cgtctgcgccgcctgacgaagatgagccgcatcgagctggaggccgaacgcgacgacctg
cgccggcgcatcgaggaactggaggcgatcctcgcttccgccgattcgctcgacgccgtg
gtgatccgggagatggacgacgccgtggccgcatatggctcgccgcgccgcaccgtgctg
ctcgatgagaacgaggatggctcgttgacacccgtgaagacgcacggtgacgattcgctg
gctgattttgcgcagtccgccgcgctcaacgccgcgaaggtctccgacgccgccgcggac
gtggccgccgccaagaaggcgagtgacgccggtatgacccaggcgttgcagatcgaggac
gaaccgtgcgtcatcgcgttgagcgcgaccgggctgatcggccgcatgaacccgaaggcc
gcggatgcatggcgcatgagggaccccgccgccgtgcagagcggcaatgatgtgatcgtc
tcgatgatccacgcgagcacacggtccacctatggcctcgtgacatccgccgggcgtttt
gtgttagcgcatgcggtggagctgccctccatcgccgtcaccgagccgttgagtctggct
ggtggcatcgatgcggccgaactcgtggtgtcgaccgagcatacggaaccggtggacggc
gaacgggtgatcgcggcggtcgccatccccggcgaaggcgaaccgctccccttggctctt
ggcacacgccatggcgtggtcaagcggtggaaccgcgaatcacccacgacgatggattcg
tggagcatcatcgacctcaaggatggcgacgaattgctcaccgcacgggaagccgccgac
ggcgaccgtgtggtgttcgtctcctctgactcctcactgctgaccttcgacgccaagctg
gtgcgtccacaggggcgcacggccgccggcatggctggcatccgccttgccgagggatgc
acggtcctgacatgcgctatcgtgcctgcagcgcaggtggcatggcatgaggcgcagacc
gatgatcagggcgcggtgaccgaagccgcacatggcgccgtcgtgctcacggtcgccggc
gatgccgacgcgttgcccggtaccgagaacggatctgcgaagctgacgccgttcagcctc
taccccaccaagggccgcgcgaccggtggcgtgcggtcgcagcggttcctcaagggccag
aacacactcgtcaaggcctatgtgggcgactatccgctcgtggcctgcaccgagcatggc
catccggtggcattgccacagccggacatgcgccgcaatggctcgggcaccgagctcacg
gcaccgatcacatacgtggcatga
DBGET
integrated database retrieval system
