Burkholderia pseudomallei MSHR146: BBN_2003
Help
Entry
BBN_2003 CDS
T03024
Name
(GenBank) PDZ domain protein
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
bpsu
Burkholderia pseudomallei MSHR146
Pathway
bpsu01503
Cationic antimicrobial peptide (CAMP) resistance
bpsu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bpsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BBN_2003
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
BBN_2003
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bpsu01002
]
BBN_2003
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bpsu03110
]
BBN_2003
Enzymes [BR:
bpsu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
BBN_2003
Peptidases and inhibitors [BR:
bpsu01002
]
Serine peptidases
Family S1: chymotrypsin family
BBN_2003
Chaperones and folding catalysts [BR:
bpsu03110
]
Other chaperones and cochaperones
DegP / HtrA
BBN_2003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ_6
PDZ
Trypsin
PDZ_Tricorn
Motif
Other DBs
NCBI-ProteinID:
AHG68399
LinkDB
All DBs
Position
1:complement(2315782..2317332)
Genome browser
AA seq
516 aa
AA seq
DB search
MSRQTLGRALIHVAALGAVLVGFACLQPTPLAAGTLQSPAKAKRIAQIGAAGPVDFPTLV
ERYGPAVVSVSVPAQDPQMSASGLEALDPDDPFFAYFKSAATQPALSPESGPRAMAGAGS
GFIVGADGIILTTAYVVGQASEATVRLIDRREFKARVLAVDDSSDVAVLQIDATKLPTVR
LGDSSRVRTGEPVLTIGTPDGSANTVTTGIVSATARMLPDGGRFPFFQTDVTGNLDNSGG
PVFNRAGEVIGIDVQIYGSGERNPGVTFAIPIDMAMKVRAQVLQAQRQARQQAPMQQAQQ
AQQAPPAAAQNALGVDAQDVGPGLAAAFGLPRPAGALVNAVEPGSPAAAVGLKPGDVIVQ
IGDRPLGRSAELAGDLAALPPGASAPITLIRNRMPMTVMLGSGAAASAPTGATASPGNAA
AGRSETGGADRLGLTMHPLTDDERRSTGLPVGMVVDAVRGPAANAGIRPGDVVLELDDTL
IETPDMVPALEAKAGKVVAVLIQRGSERRFVSVKAR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcgtcaaacgcttggccgcgccctgattcacgttgcagcgctcggggcggtgctt
gtcggcttcgcttgcctgcagccgacgccactcgccgcgggtacgctgcaatcgccggcg
aaggcgaagcgaatcgcgcagatcggcgccgcggggccggtcgattttcccacgctcgtc
gagcgatacgggcccgccgtcgtcagcgtgagcgtgcctgcgcaggatccgcagatgtcg
gcgtccggcctcgaggcgctcgatcccgacgatccgttcttcgcctacttcaaatccgcc
gccacgcagcccgcgctgtcgccggagagcgggccgcgcgcgatggcgggcgccggatcc
ggttttatcgtcggcgcggacgggatcatcctgacgaccgcgtacgtggtcgggcaggcg
agcgaggcgacggttcgcctgatcgaccggcgcgaattcaaggcgcgggtgctggccgtc
gatgattcgagcgatgtggccgtgttgcagatcgacgcgacgaagctgccgacggtgcgg
ctcggcgattcgtcccgggtgcgcacgggcgagccggtgctgacgatcggcacgccggac
ggctcggcgaacacggtgacgacgggcatcgtcagcgcgacggcgcgcatgttgcccgac
ggcggccgctttccgttcttccagaccgacgtgaccggcaacctcgacaactcgggcggc
ccggtgttcaaccgcgcgggcgaggtgatcggcatcgacgtgcagatctacggcagcggc
gagcgcaatccgggcgtgacgtttgcgattccgatcgacatggcgatgaaggtgcgtgcg
caggtgctgcaggcgcagcgccaggcgcggcagcaggcgccgatgcaacaggcgcaacag
gcgcaacaagcgccgcccgcggcggcgcagaacgcgctgggcgtcgacgcgcaggacgtc
ggtccggggctcgcggcggcgttcggcctgccgcggccggcgggcgcgcttgtcaatgcg
gtggagccggggtcgccggcggcggcggtcgggctgaagccgggcgacgtgatcgtgcag
atcggcgatcggccgctcggccgctcggcggaactggccggcgacctcgcggcgctgccg
cccggggcgagcgcgccgatcacgctgatccgcaaccggatgccgatgacggtgatgctc
ggctccggcgcggccgcgagcgcgccgacaggcgcgaccgcatcgccgggcaatgcggcc
gccggccgcagcgagacgggcggcgcggaccgcctgggcctgacgatgcatccgctgacg
gacgacgagcggcgctcgacgggattgcccgtcggcatggtggtcgatgcggtgcgcggg
ccggcggcgaacgcggggattcggccgggcgacgtcgtgctggagctcgacgatacgctg
atcgagacgccggacatggtgccggcgctggaggcgaaggcggggaaggtggtcgcggtg
ctgattcagcgggggagcgagcgcaggttcgtgtcggtgaaggcgcggtga
DBGET
integrated database retrieval system
