Burkholderia pseudomallei MSHR146: BBN_232
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Entry
BBN_232 CDS
T03024
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bpsu
Burkholderia pseudomallei MSHR146
Pathway
bpsu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBN_232 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpsu03021
]
BBN_232 (rpoA)
03400 DNA repair and recombination proteins [BR:
bpsu03400
]
BBN_232 (rpoA)
Enzymes [BR:
bpsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBN_232 (rpoA)
Transcription machinery [BR:
bpsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBN_232 (rpoA)
DNA repair and recombination proteins [BR:
bpsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBN_232 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AHG68551
LinkDB
All DBs
Position
1:245295..246272
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AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGENHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPNHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGDETAKIIGRIVLDASFSPVRRVS
YTVESARVEQRTDLDKLVMNIETSGVITPEEAIRQSARILVDQLSVFAALEGTETAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaaacccaagatcatcgccgtggaatcgctgggcgagaaccac
gcgaaggtggtgatggagccgttcgaacgcggttacggccacaccttgggcaatgcgctt
cgccgtgtgctgctgtcgtcgatggtcggttacgcgccgaccgaagtgacgatcgccggc
gtcgtgcacgagtattcgacgctcgatggtgtgcaagaggacgtcgtcaacctgctgctg
aacctgaagggcgtggtgttcaagctgcataaccgcgacgaagtcacggtgacgctgcgc
aaggaaggcgaaggcgtcgtgacggccggcgatatcgaactggcccacgattgcgaagtc
atcaacccgaatcacgtgatcgcgcatctgtcgaagggcggcaagctcgacgtgcagatc
aaggtggaaaagggccggggctacgtaccgggcaacgtgcgccgctacggcgacgaaacg
gccaagatcatcggccgcatcgtcctcgacgcatcgttctcgccggttcgccgcgtgagc
tacacggtcgagagcgcgcgcgtcgagcagcgtaccgacctcgacaagctcgtgatgaac
atcgaaacgagcggcgtcatcacgccggaagaagcgatccgccagtcggcacgcatcctc
gtcgaccagctgtccgtattcgcggcgctggaaggcacggaaacggccgcggaagccccg
tcgcgcgcgccgcagatcgatccgatcctgctgcgcccggtcgacgacctcgagttgacc
gtgcgttcggcgaactgcctgaaggccgagaacatctactacatcggcgatctgatccag
cgcacggaaaacgagctgctgaagacgccgaacctcggccgcaagtcgctcaacgagatc
aaggaagtgctcgcttcacgcggtctcacgctgggcatgaagctcgagaactggccgccg
gccggcctcgacaagtaa
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