Burkholderia pseudomallei MSHR146: BBN_4316
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Entry
BBN_4316 CDS
T03024
Name
(GenBank) DEAD_2 family protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bpsu
Burkholderia pseudomallei MSHR146
Pathway
bpsu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpsu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BBN_4316
09124 Replication and repair
03420 Nucleotide excision repair
BBN_4316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpsu03021
]
BBN_4316
03036 Chromosome and associated proteins [BR:
bpsu03036
]
BBN_4316
03400 DNA repair and recombination proteins [BR:
bpsu03400
]
BBN_4316
Enzymes [BR:
bpsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BBN_4316
Transcription machinery [BR:
bpsu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BBN_4316
Chromosome and associated proteins [BR:
bpsu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BBN_4316
DNA repair and recombination proteins [BR:
bpsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BBN_4316
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-ProteinID:
AHG70226
LinkDB
All DBs
Position
2:989957..992224
Genome browser
AA seq
755 aa
AA seq
DB search
MSYVVAVRAMCEFTARAGDLDLRFTPAPSALEGIAGHATVVSRRGTGYEKEIALSGEHRG
LTVRGRADGYDPALNRLEEIKTHRGDLDRMPANQRALHWAQARVYGHLLCESRGLAELSV
ALVYFDVGTLRETVLTETHTAATLKAGFVEQCERFADWAAREDAHRAARDAALRALAFPH
ARFRSGQRELAVAAYRAARDGRVLLAQAPTGIGKTLGALFPLLKACGQAHLDRLFFLTAK
TPGRALALDAADTLRAAAGGVLPLRVLELVARDKACEHPDAACHGESCPLARGFYDRLAA
ARAAALEHGRLDRAAVRAAALAHDVCPYYLAQELARWCDVVVGDYNYYYDGSALLHALTL
QNQWRVGVLVDEAHNLLDRARGMYSAALDQRELAGVRKLAPAPLAKALERLNREWNALNR
EQAGAYVVHPDVPQRVLSAAQNLIGCFSEFAAQAPLALDDAVLRFCFDAIHFVALAEQFG
THSIFDATRVRAGAPRRGGHASILCVRNVIPADFLASRHGAARATVMFSGTLSPFDFYRD
TLGLPGDTGTLDVEGPFRAEQLTVKVASHVSTRWRDRERSLEPIVELIAEQYAARPGNYL
GFLSSFEYLQQVVARLRERHPALPVWEQAPGMDEAARDAFLARFEPNGRGIGFAVLGGAF
SEGVDLAGDRLIGAFVATLGLPQVNGVNEEMRRAMDARFGSGYDYIYLFPGLRKVVQAAG
RVIRTEHDEGVLHLIDDRFHRGEVRRLLPRWWRLS
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtgagctacgtcgtcgcagtgcgcgcgatgtgcgaattcaccgcgcgcgcgggcgatctc
gatctgcgcttcacgcccgcgccgagcgcactcgagggcatcgccgggcacgcgacggtc
gtatcgcgccgcggcaccggctacgaaaaggagatcgcgctgtcgggcgagcatcgcggc
ctcacggtgcgcggccgcgcggacggttacgatccggcgctgaaccgcctcgaggaaatc
aagacgcatcgcggcgatctcgacaggatgcccgccaatcagcgcgcgctgcattgggcg
caggcgcgcgtgtacgggcatctgctgtgcgaatcgcgcgggctcgcggagctgagcgtc
gcgctcgtctatttcgacgtcgggacgctgcgcgagacggtgctgaccgagacgcacacg
gccgcgacgctgaaggcgggcttcgtcgagcagtgcgagcgcttcgccgactgggcggcg
cgcgaggacgcgcatcgcgccgcgcgcgatgcggcgctgcgcgcgctcgcgtttccgcat
gcgcgctttcgcagcggtcagcgcgaactcgcggtcgccgcgtaccgcgccgcgcgcgac
ggccgtgtgctgctcgcgcaggcgcccaccggcatcggcaagacgctcggcgcgctgttc
ccgctgctgaaggcgtgcgggcaagcgcatctggaccggctctttttcctgaccgcgaag
acgcccgggcgcgcgctcgcgctcgacgcggccgatacgctgcgcgcggccgcgggcggc
gtgctgccgctgcgggtgctcgagctcgtcgcgcgcgacaaggcgtgcgagcacccggac
gcggcgtgtcacggcgaatcgtgcccgctcgcgcgcggcttctacgatcggctcgcggcc
gcgcgcgccgccgcgctcgaacatgggcggctcgatcgtgcagccgtgcgcgcggccgcg
ctcgcgcacgacgtgtgcccgtactatctcgcgcaggaactggcgcgctggtgcgacgtc
gtcgtcggcgactacaactactactacgacggcagcgcgctgctgcacgcgctcacgctg
cagaaccagtggcgcgtcggcgtgctcgtcgacgaggcgcacaacctgctcgaccgcgcg
cgcgggatgtacagcgcggcgctcgaccagcgcgagctcgccggcgtgcgcaagctcgcg
cccgcgccgctcgcgaaggcgctcgagcgcctgaatcgcgaatggaatgcgctcaatcgc
gaacaggcgggggcgtacgtcgtgcatccggacgtgccgcagcgcgtgctgtcggccgcg
cagaacctgatcgggtgcttctcggagttcgcggcgcaggcgccgctcgcgctcgacgac
gcggtgctgcgcttctgtttcgacgcgatccatttcgtcgcgctcgccgagcagttcggc
acccattcgatcttcgacgcgacgcgcgtgcgcgcgggcgcgccgcgccgcggcggccat
gcgtcgatcctctgcgtgcgcaacgtgattcccgccgacttcctcgcgtcgcgccacggc
gccgcgcgcgcgaccgtgatgttctcgggcacgctcagcccgttcgatttctaccgcgac
acgctcgggctgccgggcgataccggcacgctcgacgtcgaggggccgtttcgcgcggag
caactgacagtgaaggtcgcctcgcacgtgtcgacgcgctggcgcgaccgcgagcgctcg
ctcgagccgatcgtcgagctgatcgccgagcagtacgcggcgcggccgggcaattacctc
ggattcctgagcagcttcgagtatctgcagcaagtggtcgcgcggctgcgcgagcgccat
ccggcgctgcccgtctgggagcaggcgcccggcatggacgaggccgcgcgtgacgcgttt
ctcgcgcgcttcgagccgaacgggcggggcatcggcttcgcggtgctgggcggtgcgttc
tcggaaggcgtcgatcttgccggcgaccggctgatcggcgcgttcgtcgcgacgctcggg
ctgccgcaggtcaacggcgtcaacgaggagatgcgtcgcgcgatggacgcgcgcttcggc
agcggctacgactacatctacctgtttccggggctgcgcaaggtcgtgcaggcggcgggg
cgggtgattcgcaccgagcacgacgagggcgtgctgcatctgatcgacgaccgcttccac
cgcggcgaggtgcggcggctgttgccgcggtggtggcggctgagctga
DBGET
integrated database retrieval system
