Burkholderia pseudomallei MSHR146: BBN_5230
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Entry
BBN_5230 CDS
T03024
Symbol
polA
Name
(GenBank) DNA polymerase I family protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bpsu
Burkholderia pseudomallei MSHR146
Pathway
bpsu03030
DNA replication
bpsu03410
Base excision repair
bpsu03420
Nucleotide excision repair
bpsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBN_5230 (polA)
03410 Base excision repair
BBN_5230 (polA)
03420 Nucleotide excision repair
BBN_5230 (polA)
03440 Homologous recombination
BBN_5230 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsu03032
]
BBN_5230 (polA)
03400 DNA repair and recombination proteins [BR:
bpsu03400
]
BBN_5230 (polA)
Enzymes [BR:
bpsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBN_5230 (polA)
DNA replication proteins [BR:
bpsu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BBN_5230 (polA)
DNA repair and recombination proteins [BR:
bpsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BBN_5230 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBN_5230 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AHG71237
LinkDB
All DBs
Position
2:complement(2230915..2233686)
Genome browser
AA seq
923 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIVNMLRRMRKDVSAEY
SACVFDAKGKTFRDDLYADYKAHRPPMPPDLALQIEPIHTAVRALGWPLLMIEGVEADDV
IGTLAKQAEQHGMNVIVSTGDKDLAQLVTDRVTLINTMTNEALDRDGVLAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTAVKWLTQYGSLDGVVEHAGEIKGVVGDNLRRALDFLP
LARKLVTVETGCELAPHVESFDASLATDGEGRDALREIFAKYGFKTWLRELDSEPAAAAG
AAAAGAAPDPASGATAELPLATARNYATVQTWEQFDAWLAKISAAELTAFDTETTSLDPM
RAQIAGLSFSVEPGHAAYVPVAHRGPDMPAQLPRDEVLAKLTPWLEDAGKKKLGQHLKYD
AQVLANYGIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAQQIG
FDEVPLAQASEYAAEDADITLQLHHALYPQIAREPGLTRVYRDIELPVSLVLRKMERTGV
LIDGDRLSRQSGEIATRLVALEQEAYALAGGEFNLGSPKQIGQIFFERLQLPVVKKTPSG
APSTDEEVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPDTGRVHTNYAQAVAV
TGRLASNDPNLQNIPVRTAEGRRIREAFVAPPGSKIVSADYSQIELRIMAHISEDESLLR
AFAHGEDIHRATAAEVFGVTPLEVTSDQRRIAKVINFGLIYGMSSFGLASNLGITRDAAK
LYIDRYFLRYPGVARYMEETRMRAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAIN
APMQGTAADLIKLSMIAVDDWLERGGLHARMIMQVHDELVLEVPEDELSIVREKLPEMMC
GVAKLKVPLVAEVGVGENWEEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgcggccctggcggggagccgaccgga
gcgctctacggaatcgtcaatatgttgcgccgcatgcgcaaggatgtcagtgcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaaccttccgcgacgatctgtatgccgactac
aaggcgcaccgcccgccgatgccgcccgatctcgcgctgcagatcgagccgatccatacg
gccgtgcgcgcgctcggctggccgctgttgatgatcgagggcgtcgaggccgacgacgtg
atcggcacgcttgcgaagcaggccgaacaacacggcatgaacgtgatcgtctcgacgggc
gacaaggatctcgcgcagctcgtcaccgatcgcgtcacgctcatcaacacgatgacgaac
gaggcgctcgaccgcgacggcgtgctcgcgaagttcggcgtgccgccggagcggatcgtc
gattacctgtcgctcatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtcaagtggctcacgcagtacggctcgctcgacggcgtcgtcgaacat
gcgggcgagatcaagggcgtcgtcggcgacaacctgcgccgtgcgctcgatttcctgccg
ctcgcgcgcaagctggtgacggtcgagaccggctgcgagctcgcgccgcacgtcgaatcg
ttcgacgcgtcgctcgcgacggacggcgagggccgcgacgcgctgcgcgagatcttcgcg
aagtacggcttcaagacgtggctgcgcgagctcgacagcgaacccgccgccgcagccggt
gcggccgccgccggcgccgcgccggatccggcgagcggcgcgacggccgaactgccgctc
gccacggcgcgcaactacgcgaccgtgcagacgtgggagcagttcgacgcatggctcgcg
aagatctccgccgcagagctgaccgcgttcgacaccgagacgacgtcgctcgacccgatg
cgcgcacagatcgccggcctgtcgttctcggtggagccgggccatgccgcgtacgtgccg
gttgcgcaccgcgggccggacatgcccgcgcaactgccgcgcgacgaagtgctcgcgaag
ctcacgccgtggctcgaggatgcgggcaagaagaagctcggccaacacctgaagtacgac
gcgcaggtgctcgcgaactacggcatcgcgctgaacggcatcgagcacgacacgctgctc
gaatcgtatgtgctcgaatcgcaccgcacgcacgacatggacagcctcgcgctgcgccat
ctcggcgtgaagacgatcaagtacgaggacgtggcgggcaagggcgcgcagcagatcggc
ttcgacgaggtgccgctcgcgcaggcgtccgagtatgcggcggaagacgccgacatcacg
ctgcagctgcatcacgcgctgtatccgcagatcgcgcgcgagccgggcctcacgcgcgtg
tatcgcgacatcgagctgccggtgtcgctcgtgttgcgcaagatggagcgcaccggcgtg
ctgatcgacggcgacaggctgagccgccagagcggcgagatcgcgacgcggctcgtcgcg
ctcgagcaggaggcgtacgcgctcgcgggcggcgaattcaatctcggctcgccgaagcag
atcggccagattttcttcgagcggctgcaattgcccgtcgtcaagaagacgccgagcggc
gcgccgtcgaccgacgaggaggtgctgcaaaagctcgccgaggactatccgctgccgaag
ctgttgcttgagcaccgcggcctgtcgaagctgaaatcgacctataccgacaagctgccg
cgcatggtcaatccggacacgggccgtgtgcacacgaactatgcgcaggcggtggcggtc
accgggcggctcgcgtcgaacgatccgaacctgcagaacatcccggtgcgcacggccgaa
gggcggcgcatccgcgaggcgttcgtcgcgccgccgggcagcaagatcgtgtccgccgac
tattcgcaaatcgagctgcgcatcatggcgcacatctcggaggacgaatcgttgctgcgc
gcgttcgcgcacggcgaggacattcaccgcgcgaccgcggcggaggtgttcggcgtgacg
ccgctcgaagtgacgtccgatcagcggcgcatcgcgaaggtgatcaacttcggtctgatc
tacgggatgagttcgttcggcctcgcgtcgaatctcggcatcacgcgcgatgcggcgaag
ctctatatcgaccgctacttcctccgctatccgggcgtcgcccgctacatggaggaaacg
cgcatgcgggcgaaggagaagggctacgtcgaaaccgtgttcggccgccgcctgtggctg
cccgagatcaacggcggcaacgggccgcgccgccaggccgccgagcgcgcggcgatcaac
gcgccgatgcagggcacggccgccgatctgatcaagctgtcgatgatcgcggtcgacgac
tggctcgagcgcggcggcttgcacgcgcgaatgatcatgcaggtgcacgacgaactcgtg
ctcgaggtgccggaggacgagctgtccatcgtgcgcgagaagctgccggagatgatgtgc
ggcgtcgcgaaactgaaggtgccgctcgtcgccgaggtcggcgtcggcgagaactgggaa
gaggcgcactga
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