Burkholderia pseudomallei MSHR146: BBN_6015
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Entry
BBN_6015 CDS
T03024
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
bpsu
Burkholderia pseudomallei MSHR146
Pathway
bpsu02020
Two-component system
bpsu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BBN_6015
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BBN_6015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpsu03021
]
BBN_6015
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bpsu02035
]
BBN_6015
Transcription machinery [BR:
bpsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBN_6015
Bacterial motility proteins [BR:
bpsu02035
]
Flagellar system
Flagellar assembly proteins
Stator
BBN_6015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AHG71245
LinkDB
All DBs
Position
2:3184615..3185325
Genome browser
AA seq
236 aa
AA seq
DB search
MTTLDDCAAARTAYARAGAGAEQRWLVEYAPIVKRAARQLKSQAVGMLTLDDIEQIGLMG
LLEALRRYGMPDAAFPCYAATRVRGAILDELRRHDWRPRSVRLEAHRTRDCERELCRSLG
REPTEAEVSDALGISTTEYRERVMANNAEAMASFDSVLDDDALTHEESPEREIVRRRCLE
QALARLNEREQRVIQLYYEFDLSLREIASVLGLTEARVCQINKAALKKMREVLSDA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacgacactggacgattgcgccgccgcgcgcactgcttatgcgcgcgccggagcgggc
gccgagcagagatggctggtggagtacgcaccgatcgtcaagcgcgccgcccgccagttg
aagtcgcaggcagtcggcatgctgacgctcgatgacatcgagcagattggcctgatgggg
ctgctcgaggcgctgcgccgctatggtatgccagatgcggccttcccatgctacgcggcg
actcgcgtgcgcggcgcgattctcgacgagttgcgccgtcacgactggcggccgcgttcg
gtgcgcctggaggcgcatcgcacgcgcgactgcgaacgcgagctgtgccgctcgctcgga
cgcgagccgacggaagccgaggtcagcgatgcgctcggcatcagcacgacggaataccgc
gaacgcgtgatggcgaacaatgcggaggccatggcgagcttcgacagcgtgctcgacgac
gacgcgttgacccacgaagaaagccccgaaagggagatcgtccggcgtcgctgcctcgag
caggccctcgctcgcctcaacgagcgcgagcagcgcgtgatccagctgtactacgaattc
gatttgagcctgcgcgagatcgcgtccgtcctcggcttgaccgaggcgcgggtttgccag
atcaacaaagcggccctcaagaagatgcgagaggtgttgagcgatgcatga
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