Burkholderia pseudomallei MSHR146: BBN_873
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Entry
BBN_873 CDS
T03024
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bpsu
Burkholderia pseudomallei MSHR146
Pathway
bpsu03030
DNA replication
bpsu03430
Mismatch repair
bpsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBN_873
03430 Mismatch repair
BBN_873
03440 Homologous recombination
BBN_873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsu03032
]
BBN_873
03400 DNA repair and recombination proteins [BR:
bpsu03400
]
BBN_873
Enzymes [BR:
bpsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBN_873
DNA replication proteins [BR:
bpsu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBN_873
DNA repair and recombination proteins [BR:
bpsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBN_873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
GIY-YIG
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AHG68060
LinkDB
All DBs
Position
1:942828..943973
Genome browser
AA seq
381 aa
AA seq
DB search
MSASPPPHPAIDTPLAFVDLETTGGSAAEHRITEIGVVVVNANGVSTWTTLVDPQQPIPP
FIQQLTGITDAMVRGAPTFADIAGALFERLDGKLFVAHNASFDRGFLRAEFERAGIAFNP
DVLCTVRLSRALFPRESRHGLDALIERHALAPSARHRALADADLIWQFWQKLHAVIPAEQ
LSEQIVRTTRRFRLAGALTEAHLESAPAGCGVYALFGDGDAPLYVGRSVRVRQRLRALLT
GERRSSKETRLAQLVRRVEWRETGGELGALLAEADWIASLAPSFNRRSDRGATGDAHWPF
GGPVAFEERGESRVFHVIDQWRYVGAASSIERAATLAADARAAGEGARSAAPAVRRILQT
HLVRGLQLIPIPLAGAAPAAA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcgccgccgccgcatcccgcgatcgacacgccgctcgcgttcgtcgacctc
gaaaccaccggcggatcggccgccgagcatcgcatcaccgaaatcggcgttgtcgtcgtg
aacgcgaacggcgtatcgacatggacgacgctcgtcgatccgcagcagccgattcccccg
ttcatccagcagctcacgggtatcaccgacgcgatggtgcgcggcgcgccgacgtttgcc
gacattgcgggcgcattgttcgagcggctcgacggcaaacttttcgtcgcgcacaacgcg
agcttcgaccgaggctttctgcgcgcggagttcgagcgagcgggcatcgcattcaatccc
gacgtgctttgcacggtgcggctgtcgcgcgcgcttttcccgcgcgagtcgcgccatggg
ctcgacgcgctgatcgagcggcacgcgctcgcgccgtcggcacgccaccgggcgctcgcc
gacgcggatctcatctggcagttctggcaaaagttgcacgccgtgataccggccgagcaa
ctgagcgagcagatcgtgcgcacgacgcgccggttcaggctcgcgggggcgttgacggaa
gcgcatctggaaagcgcgcccgccggctgtggtgtctacgcgctgttcggcgacggcgac
gcgccgctctatgtcggccgaagcgtgcgggttcgccagcggctgcgcgcgctgctgacg
ggggagcggcgctcgtcgaaggaaacacggctcgcgcagctcgtgcggcgggtcgaatgg
cgcgagacgggcggcgagctcggcgcgctgcttgccgaggcggactggatcgcgtcgctt
gcgccatcgttcaaccggcggtcggaccgcggcgcgacgggcgatgcgcattggccgttc
ggcgggccggtcgcgttcgaggagcgcggcgaatcgcgtgtttttcatgtgatcgatcag
tggcgctacgtcggcgcggcatcgtcgatcgagcgggcggcgacgctcgcggccgacgcg
cgcgcggcgggcgaaggcgcgcggagcgccgcgccggcggtgcgccgcattctgcagacg
catctcgtgcgcgggcttcaactgattccgattccgctcgcgggcgccgcgcctgccgcc
gcctaa
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