Bordetella petrii: Bpet0822
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Entry
Bpet0822 CDS
T00637
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bpt
Bordetella petrii
Pathway
bpt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bpet0822 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpt03019
]
Bpet0822 (pcnB)
Enzymes [BR:
bpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Bpet0822 (pcnB)
Messenger RNA biogenesis [BR:
bpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Bpet0822 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CAP41154
UniProt:
A9I5Z4
LinkDB
All DBs
Position
complement(909293..910648)
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AA seq
451 aa
AA seq
DB search
MITDTIKKFVSRLFTPAARGPQRITRDKHGIDRRNVSRHAIKVCEVLRQHGYSAYIVGGA
VRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPAS
QDQETDEHGRILRDNVFGTHEEDAARRDFTMNALYYDPHTEEVIDYHNGVQDLKKRQVRI
IGDPAQRYREDPVRMLRAVRFAAKLNGSIDPATRKPIGTMAPLIENVPASRLFDEMLKLL
TCGHAMDCLRQLRADGLHHGLLPLLDVVLEQPGGEHFVELALERTDSRVRAGKSISPSFL
FASLLWQQVESRWKQLRAQGEHSVPALVRAADSVLDEQTEKLAIQRRFSADMREIWFMQP
RFERRMGKTIYRMIEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRADMIEE
LGRLPRDPAEAGAPRKRRRRPRRAAAPREAE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgacaccataaaaaaatttgtcagccggctgttcacgccggcggcccgaggg
cctcagcgcatcacgcgcgacaagcacggcatcgaccggcgcaacgtttcccgccacgcc
atcaaggtctgtgaagtgctgcgccagcacggctattcggcctacatcgtgggcggcgcc
gtgcgcgacctgatcgtgggcctggaacccaaggatttcgacgtggccaccaacgccacg
cccgaacagatccgcccgctgttccgccgcgcccgcatcattggccggcgcttccagctg
gtgcacgtggtgttcggccaggagatcatcgaaacctctacgttccgggctcctgcctcg
caagaccaggagaccgacgagcacggccgcatcctgcgcgacaatgtgttcggcacccac
gaagaagatgccgcgcggcgcgatttcaccatgaacgcgctgtactacgatccgcacacc
gaagaggtcattgactaccacaacggcgtgcaagacctgaaaaaacgccaggtgcgcatc
attggcgacccggcccagcgctaccgcgaagacccggtgcgcatgctgcgcgccgtgcgt
ttcgccgccaagctcaatggcagcatcgaccccgccacacgcaagcccatcggcaccatg
gcgccgctgatcgagaacgtgccggcctcgcgcctgttcgacgaaatgctcaagctgctg
acctgcggccatgccatggactgcctgcgccagttgcgcgccgacggcctgcatcacggc
ctgctgcctctgcttgacgtcgtgctggagcagcccggcggcgaacacttcgtcgagctg
gcgctcgaacgcaccgactcgcgcgtgcgcgccggcaagagcatcagccccagcttcctg
tttgcgtcgctgttgtggcagcaagtggaatcgcgctggaagcagctgcgcgcccagggt
gaacactcggtgcccgcgctggtgcgcgccgccgattcggtgctggacgagcagaccgaa
aagctggccatccagcgccggttttcggccgacatgcgcgaaatctggttcatgcagccc
cgcttcgagcgccgcatgggcaagaccatctaccgcatgatcgagcagccgcgctttcgc
gcggcctgcgacttcctgcaattgcgggccgcggccggcgagttcgacagcgtgctggcc
cagtggtggatggacctggccaatggcgacgacgccacccgcgccgacatgatcgaagaa
ctgggccgcctgccgcgcgacccggccgaagccggcgccccgcgcaagcggcgccgccgt
ccgcgccgcgccgccgcgccgcgcgaggccgaatga
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