Bordetella petrii: Bpet0924
Help
Entry
Bpet0924 CDS
T00637
Symbol
rhlE2
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bpt
Bordetella petrii
Pathway
bpt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bpet0924 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpt03019
]
Bpet0924 (rhlE2)
Enzymes [BR:
bpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bpet0924 (rhlE2)
Messenger RNA biogenesis [BR:
bpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bpet0924 (rhlE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
LBP_BPI_CETP_C
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
CAP41256
UniProt:
A9I8K3
LinkDB
All DBs
Position
1018110..1019540
Genome browser
AA seq
476 aa
AA seq
DB search
MTDSTTPEAPSTDAPTSTFADFGLHPQLLQSVADTGYTTPTPIQAQALPAVMAGRDVMGA
AQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRTLILTPTRELADQVYESVKRYSKHT
PLRSAVVFGGVDIGPQKEALRRGCEILVATPGRLLDHVEQKTVNLSQVGILVLDEADRML
DMGFLPDLDRIVRLLPAQRQGLLFSATFSNEIRKLGRTYLNQPVEIEVAARNATADTVSQ
IAYQMPSDAKRAAVVHLVKSRGLKQVIVFSNTKIGTARLARELERDGVRAESIHGDKSQA
DRMKALDAFKAGELEVLVATDVAARGLDVAGVPCVINYDLPHNAEDYVHRIGRTGRAGAS
GEAIALFTADETRYLQDIEKLTKRPVPRGTLDVPRDLVARSHTRDTRDGRDARGRGRERR
GSSQAYGAPQQPVDDFFYKPYEPAAPAADQAEPKTESRSSTPKRQVAVLLGGSRKP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgactgactccactacccccgaagctcccagcaccgacgcgcccacctcgactttcgcc
gacttcggactgcacccgcaactgctccagtcggttgccgacaccggatacaccaccccg
acgcccatccaggcgcaggctctgcctgccgtgatggccgggcgcgatgtcatgggcgcg
gcgcaaaccggcaccggcaagacggcggcctttacgctgcccatcctgcatcgcctgatg
ccactggccaataccagcgcatcgccggcgcggcatccggtgcgcacgctcatcttgacg
cccacgcgcgaactcgccgaccaggtctacgagagcgtcaagcgctatagcaagcacacg
ccgctgcgctcggccgtggtgttcggcggggtcgatatcggaccccagaaagaggcgctg
cggcgcggctgcgagatcctggtggccacgccgggccgcctgctcgaccacgtcgagcaa
aaaaccgtcaacctcagccaggtgggcatcctggtgctggacgaggccgaccgcatgctc
gacatgggcttcctgcccgacctcgaccgcatcgtcaggctgctgccggcgcagcgccag
gggctgctgttctcggccactttcagcaacgaaatccgcaagctgggccgcacctacctg
aaccagccggtcgaaatcgaagtcgccgcgcgcaatgccacggccgatacggtcagccag
atcgcctaccagatgcccagcgacgccaagcgcgccgcggtggtgcacctggtgaagtcg
cgcgggctgaagcaggtgatcgtgttctcgaacaccaagatcggcacggcgcgcctggcg
cgcgaactcgagcgcgacggcgtgcgggccgaatccatccacggcgacaagagccaggcc
gaccgcatgaaggcgctcgacgccttcaaggccggcgagctcgaagtgctggtggctacc
gacgtggccgctcgcggcctggacgtggccggcgtgccctgcgtcatcaactacgacctg
ccgcacaacgccgaagactacgtgcaccgcatcggccgcaccggccgcgcgggcgcttcg
ggcgaagccatcgcgctgttcaccgctgacgaaacccgttacctgcaagacattgaaaag
ctcaccaagcggccggtgccgcgcggcacgctcgacgtgccccgcgacctggtggcgcgc
agccacacgcgcgatacgcgcgacggccgcgatgcccggggccgcggccgcgagcggcgc
gggtcttcgcaggcctacggcgcgccgcagcagccggtggatgattttttctacaagccg
tacgagccggccgcgcccgcggctgaccaggccgagccaaaaacggaatcccgcagcagc
acgcccaagcgccaggtggcggtgctgctgggcggcagccgcaagccctga
DBGET
integrated database retrieval system
