Bordetella petrii: Bpet1966
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Entry
Bpet1966 CDS
T00637
Symbol
hrpA
Name
(GenBank) putative ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
bpt
Bordetella petrii
Brite
KEGG Orthology (KO) [BR:
bpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpt03019
]
Bpet1966 (hrpA)
Enzymes [BR:
bpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Bpet1966 (hrpA)
Messenger RNA biogenesis [BR:
bpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Bpet1966 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
NACHT
T2SSE
nSTAND3
SLFN-g3_helicase
AAA_30
SRP54
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CAP42305
UniProt:
A9IJW8
LinkDB
All DBs
Position
2038652..2042533
Genome browser
AA seq
1293 aa
AA seq
DB search
MPEVSRPSARGAAPRPERPIPAIAYPEDLPVSARRAEIARAIAGHQVVIVSGETGSGKTT
QLPKICLELGRGRQRMIGHTQPRRLAATSVAKRIAEELNTPLGEVVGYQVRFNDRTGPNA
SVKLMTDGILLAESQRDPLLRRYDTLIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIIT
SATIDAERFARHFAASEDRPAPVIEVSGRLYPVEVRYRPVRQDDAEEPSGGRPNRERLAG
DEERDLIDAIVDAVDECARHGPGDVLVFLPGEREIRESAEALRKRHPAGTEVLPLYARLS
QAEQEQIFHPRTNARRIVLATNVAETSLTVPGIRFVVDSGLARIKRYSWRNKVEQLRIEP
ISRASANQRAGRCGRVGPGVCIRLYDEQDFDARAAFTDPEVLRSSLASVILRMKSLKLDD
IEQFPFVEAPPGRAIADGYHLLQELGAIELATPAADETPEAADGARAGSAFVLTRTGHEL
AKLPVDPRIGRMILAAREHQCLAEMLIIASALSVQDPRDRPMAEREAAEAAHAKFADDKS
EFVSFLKLWRWYGEQVQHKASQRKLVALLRQNFLSPVRLREWHDVHTQLAALVGEQGWRL
NQSEATYEQLHLALLSGLLGNIGFKGEEGGLYRGARDIRFHIHPGSRLAKKGGRWIMAAE
LVETTRLYARCVARIEPTWLERVAAHLLRRNWSDPRWEKKAGQVVANERATLYGLVVYAG
RRVHYGRVNPQHARELFIRQALVPGDIDTRLPFVAHNRKLIAGIEKLEHQSRRPDILVDD
ELIYAFYDRQLPPDISQTASLEKWVHGLDKASAAALMLTRDELMRHEAAGVTTDVFPKQV
EWQGVSMPLDYHFEPGSPRDGVTLSVPLFALNQIDSARCEWLVPGMLKEKVHLLLKSLPQ
KLRRHCVPLPDYAAGFYERWYERLDDPQRGLVDALIADMWSQVQVRPAPGDFKLETLPAH
LFMNFKVVDEHGRMLAAGRNLAQLKAEFGKQAQATFQQLAVRDTEVAQALAHENLTSWSF
GPLPEIMEIKRKGQSVIGYPALVDRGAHCDLDVFDDPDEARRLHRAGLLKLFRLGLREQV
KFLEKNLPDLTKMSMFYMNLGTQEELRDQIIDCAVAQACLAEPWPANAEEFEARRQEGKG
RLGLLAQEAARLAYAVLTEYGAVQRKLPQAKPHAAAYTDLQQQIAALMPKWFVRDTPHAQ
LAHYPRYLKAAVARIDKLRADPARDTRLMAEMAPLLTQYQRARAALKGALDPRLDEFRWL
LEELRVALFAQELRTPMPVSVKRLLKAWESMRR
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagtctcccgcccgtccgcgcgcggcgccgcgccgcgccccgagcgacccatc
cccgccattgcctatcccgaagacctgcccgtcagcgcccgacgggccgagatcgcgcgc
gccatcgccggccaccaggtggtgatcgtcagtggcgagaccggctcgggcaagaccacc
caactgcccaagatctgcctggaactcggccgcggccgccagcgcatgatcggccacacc
cagccgcggcgcctggccgccacgtcggtcgccaagcgcatcgccgaagagctgaacacg
ccgctgggcgaagtggtggggtaccaggtgcgctttaacgaccgcaccggacccaatgcc
tcggtcaagctgatgaccgacggcattttgctggccgagtcgcagcgcgacccgctgctg
cgccgctacgacaccctgatcatcgacgaggcgcacgagcgcagcctgaacatcgatttc
ctgctgggctacctgaagcaactgctgccgcggcgcccggacctgaaagtcatcatcacc
tcggccaccatcgacgccgagcgcttcgcgcggcatttcgcggcgtccgaagaccgcccc
gcgcccgtcatcgaagtgtcggggcggctgtatccggtggaagtgcgctatcgcccggtg
cggcaggacgacgccgaagaaccctccggcggccggccgaaccgcgaacgcctggccggc
gacgaagagcgcgacctcatcgacgccattgtcgatgcggtggacgagtgcgcgcgccat
ggccctggcgacgtgctggtgttcctgccgggcgaacgcgagatccgcgaatcggccgag
gcgctgcgcaagcgtcatcccgccggcaccgaagtcttgccgctgtatgcccgcctgtcg
caggccgagcaagagcagattttccatccgcgtaccaatgcgcgccgcatcgtgctggcc
accaacgtggccgagacctcgctcaccgtgccgggcatccgcttcgtggtcgacagcggc
ctggcgcgcatcaagcgctattcgtggcgcaacaaggtcgagcagctgcgcatcgaaccc
atcagccgggcctcggccaaccagcgcgcaggccgctgcgggcgggtggggccgggcgtg
tgcatccgcctgtacgacgaacaggacttcgacgcgcgcgcggcgtttaccgaccccgag
gtgctgcgctcatcgctggcctcggtgattctgcgcatgaagtcgctcaagctcgacgac
atcgagcagtttccgttcgtcgaggcgccgcccgggcgcgccatcgccgacggctaccac
ctgctgcaagagctgggcgccatcgagctggccacgccggcggccgacgagacccccgag
gccgccgacggcgcgcgcgccggctcggccttcgtgctgacccgtaccggccacgagctg
gccaagctgccggtcgacccgcgcatcggccgcatgatcctcgccgcccgcgagcaccag
tgcctggccgaaatgctgatcatcgcctcggcgctgtcggtgcaagatccgcgcgaccgc
cccatggccgagcgcgaggcggccgaggccgcgcacgccaagtttgccgacgacaagtcc
gagttcgtgtcgttcctgaaactgtggcgctggtatggcgaacaggtgcagcacaaggcc
tcgcagcgcaagctggtggcgctgctgcgccagaatttcctgtcgccggtccggctgcgc
gaatggcacgacgtgcatacgcagttggcggcgctggtgggcgaacagggctggcgcctg
aaccagtccgaggcaacctacgagcaactgcacctggccctgctgtcggggctgctgggc
aacatcggtttcaagggcgaagagggcggcctttaccggggcgcgcgcgacatccgcttt
cacattcacccgggatcgcgcctggccaagaaaggcgggcgctggatcatggccgccgaa
ctggtcgaaaccacgcggctgtatgcgcgctgcgtggcgcgcatcgagcctacctggctg
gaacgcgtcgccgcccatctgctgcgccgcaactggtcggacccgcgctgggaaaaaaag
gccggccaggtggtggccaacgaacgcgccacgctgtacgggctggtggtgtacgccggc
cgccgcgtccactacgggcgcgtcaacccgcagcatgcgcgcgaattgttcatccgccag
gcgctggtgccgggcgacatcgatacgcgcctgccgttcgtggcgcacaaccgcaagctt
atcgcgggcatcgaaaaactcgaacaccagtcgcgccggccggacatcctggtggacgac
gaactcatctacgcgttctacgaccgccagctgccgccagacatttcgcagaccgcctcg
ctggaaaagtgggtgcacgggctggacaaggcttctgccgccgcgctgatgctcacgcgc
gacgagctcatgcgccacgaggcggccggcgtcaccacggacgtgtttcccaagcaggtc
gagtggcagggcgtgtccatgccgctggactatcatttcgagccgggctcgccgcgcgac
ggcgtgacgctgtccgtgccgctgttcgcgctgaaccagatcgactcggctcgctgcgag
tggctggtgcccggcatgctgaaagaaaaagtgcacctgctgctgaagtcgctgccgcag
aagctgcgccgccattgcgtgccgctgcccgattatgcggccggcttctatgaacgctgg
tacgagcgcctggacgatccgcagcgcggcctggtggacgccctgatcgccgacatgtgg
tcacaggtgcaagtgcggcccgcgccaggcgatttcaagctcgagacgctgcccgcgcac
ttgttcatgaatttcaaggtggtcgatgagcacggccgcatgctggcggccggccgcaac
ctggcgcagctcaaggccgaattcggcaagcaggcgcaggccacgttccagcagctggcg
gtacgcgacaccgaggtggcgcaggcgctggcgcacgagaacctcacgtcgtggtcgttc
ggcccgctgcccgaaatcatggagatcaagcgcaaggggcagtcggtgatcggctatccg
gcactggtcgaccggggcgcgcattgcgatctggacgttttcgacgacccggacgaggcg
cgccgcctacatcgcgccgggctgctgaagctgttccggctgggcctgcgcgagcaggtg
aaattccttgagaagaacctgcccgacctgaccaagatgagcatgttctacatgaatctg
ggcacacaggaggaattgcgcgaccagatcatcgattgcgccgtggcccaggcatgcctg
gccgagccatggccggccaatgccgaagaattcgaggcccgacgccaggagggcaagggc
cgcctggggctgctggcgcaggaagccgcgcgcctggcgtacgcggttctcacagaatac
ggcgcggtgcagcgcaagctaccgcaagccaaaccgcacgccgcggcctataccgacctg
cagcagcaaatcgccgcgttgatgcccaagtggttcgtgcgcgatacgccgcacgcgcaa
ctggcgcattacccgcgctacctgaaggcggcggtggcgcgcatcgacaagctgcgcgcc
gatccggcgcgcgatacacggctgatggccgagatggcaccgctgctgacccagtaccag
cgggcccgtgccgccctgaaaggcgccctggacccgcgcctggacgaattccgctggttg
ctggaagagctgcgggtggcgctgttcgcccaggaactgcgcacgcctatgccggtgtcg
gtgaaacggctgttgaaagcatgggagtcgatgcgcaggtag
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