Bordetella petrii: Bpet1970
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Entry
Bpet1970 CDS
T00637
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bpt
Bordetella petrii
Pathway
bpt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bpet1970 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpt03021
]
Bpet1970 (rho)
03019 Messenger RNA biogenesis [BR:
bpt03019
]
Bpet1970 (rho)
Transcription machinery [BR:
bpt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Bpet1970 (rho)
Messenger RNA biogenesis [BR:
bpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bpet1970 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
S1CSD-TOTE-2
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAP42310
UniProt:
A9IJX7
LinkDB
All DBs
Position
complement(2051955..2053211)
Genome browser
AA seq
418 aa
AA seq
DB search
MHLNELKALHVSQLLEMAAGLEIENANRLRKQELMFAIMKRRAKQGEQIFGDGVLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GVAPEAIKHRIMFENLTPLHPNQPLRLERDIKSEENLTGRIMDIFAPIGKGQRGLIVASP
KSGKTVMMQHIAHAITTNYPDAVMIVLLVDERPEEVTEMQRTVRGEVVASTFDEPATRHV
QVAEMVIEKAKRLVEMKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTILGTALIETGSRMDEVIYEEFKGTGNSEVHLERRLAEKRVYPAINL
NKSGTRREELLIKPELLQKVWVLRKFIHDMDEVQSMEFILDKMRATKTNAEFFDMMKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcaatgaactgaaggcgctgcacgtttcgcagctgctggaaatggccgctggc
ctggaaatcgaaaacgccaaccgcttgcgcaagcaagagctgatgttcgccatcatgaag
cggcgcgccaagcagggcgagcagattttcggcgacggcgtgctcgaagtgctgcccgac
ggcttcggattcctgcgctcgcccgagacctcatacctggccagcaccgacgacatctac
atttcgccgtcgcagatccgccgcttcaacctgcacaccggcgactccatcgaaggcgaa
gtgcgcacccccaaagatggcgagcgctacttcgcgctggtgaaggtcgacaaggtcaac
ggcgtggcccccgaggcgatcaagcatcgcatcatgttcgaaaacctgacgccgctgcac
cccaaccagccgctgcgcctggaacgcgacatcaagagcgaggaaaacctcaccggccgc
atcatggacatcttcgcccccatcggcaaagggcagcgcggcctgatcgtggccagcccc
aagtcgggcaagacggtgatgatgcagcacatcgctcacgccatcaccaccaactacccc
gacgccgtcatgatcgtcctactggtggacgaacgccccgaagaagtcaccgaaatgcag
cgcaccgtgcgcggcgaagtggtggcgtccaccttcgacgaacccgcgacgcgccacgtg
caagtggctgaaatggtcatcgaaaaggccaagcgcctggtcgagatgaaaaaagacgtg
gtgatcctgctggattccatcacgcgcctggctcgcgcctacaacacggtggtgcccgcc
tcgggcaaggtgctcaccggcggcgtcgacgccaacgccctgcaacgccccaagcgcttc
ttcggcgcggcgcgcaacctcgaagaaggcggctcgctcaccatcctgggcacggcgctc
atcgagaccggcagccgcatggacgaggtcatctacgaagaattcaagggcaccggcaac
tccgaagtgcacctcgaacgccgcctggccgaaaagcgcgtctacccggccatcaacctg
aacaaatcgggcacccgccgcgaagaactgctgatcaagcccgaactgctgcaaaaggta
tgggtactgcgcaagttcatccacgacatggacgaagtccagtcgatggaattcatcctc
gacaagatgcgcgccaccaagaccaatgccgaattcttcgacatgatgaaaaagtaa
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