Bordetella petrii: Bpet2780
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Entry
Bpet2780 CDS
T00637
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bpt
Bordetella petrii
Pathway
bpt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bpet2780 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpt03400
]
Bpet2780 (uvrB)
DNA repair and recombination proteins [BR:
bpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bpet2780 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bpet2780 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
DUF87
Kinesin
UB2H
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
CAP43122
UniProt:
A9IR19
LinkDB
All DBs
Position
complement(2920660..2922687)
Genome browser
AA seq
675 aa
AA seq
DB search
MTAPGFVDFPDSPFHLYQPYPPAGDQPAAIEGLAQGMRDGLMYQTLLGVTGSGKTYTMAN
IIARLGRPALVLAPNKTLAAQLYAEMREFFPKNAVEYFVSYYDYYQPEAYVPTRDLFIEK
DSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRAGDRISRRE
VLARLVAMQYTRNDADFARGTFRVRGETLDIFPAESPELALRLTLFDDEIESLELFDPLT
GRVRQKVPRFTVYPGSHYVTPRDTVLRAIETIKEELRDRLKLLTAEGKLVEAQRLEQRTR
FDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTMGQLGGMY
RGDRARKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHSDNVVEQV
VRPTGLVDPQVEVRPARTQVDDLLGEIKLRVAAQERVLVTTLTKRMAEDLTDFLAEHGVR
VRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNLNGHAILYADAITASMRRAMDETERRRTKQLAFNAEHGITARGVNKA
VRELIDGIVAPARHDTLESAIAPEVLADEKSVAREIRRLEKLMTDHARNLEFEQAAAARD
ALNALKQRVLLDGAA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcccggattcgtcgattttcccgacagcccttttcacctgtaccagccatac
ccgccggcgggcgaccagcccgccgccatcgaaggcctggcccagggcatgcgcgacggc
ctcatgtaccagaccctgctgggcgtgacgggctcgggcaagacatacaccatggccaac
atcatcgcccggctgggccggccggccctggtgctggcgcccaacaagacgctggcggcc
cagttgtacgcggaaatgcgggagttcttcccgaagaacgcggtcgagtatttcgtttct
tattacgactactaccagcccgaagcctacgttcccacccgcgacctgttcatcgagaaa
gactcatccatcaacgagcacatcgagcagatgcggctgtcggccaccaaaagcctgctc
gaacgccgcgacactgtcattgtcggcaccgtttcgtgcatatacggtatcggcaacccg
ggcgactaccacgccatggtgctcatcctgcgcgcgggcgaccgcatttctcggcgcgag
gtgctggcgcggctggtggccatgcagtacacccgcaacgacgccgacttcgcccgcggc
accttccgggtacgcggcgaaacactcgacatcttcccggccgaaagccccgagctggcg
ctgcgcctgacgctgttcgacgacgagatcgagtcgctcgagctgttcgacccgctcacc
ggtcgggtgcgccagaaagtgccgcgcttcacggtctaccccgggtcgcactatgtcact
ccgcgcgacacggtgctgcgcgccatcgaaaccatcaaggaagaactgcgcgaccgcctc
aagctgctgaccgccgagggcaagctggtggaggcgcagcggctcgagcagcgcacccgc
ttcgacctcgaaatgttgcaagagctgggtttctgcaaaggcatcgagaactactcccgc
cacctgtccggcgccgccccgggcgagccgccgcccacgctcatcgattacctgccggcc
gacgcgctgatgttcatcgacgaaagccacgtcaccatgggtcagctgggcgggatgtac
cggggcgaccgggctcgcaaggaaaccctggtgcaatacggtttccggctgccgtcggcg
ctcgacaaccggccgctgcgcctcgaagaattcgaggcgcgcatgcgccagtgcgtgttc
gtgtcggccacgccggccgcctacgagcaagaacattccgacaacgtagtcgagcaggtg
gtgcggcccaccgggctggtcgatccgcaggtcgaggtgcgcccggcccgcacgcaggtc
gacgacctgctgggcgagatcaaactgcgcgtggcggcccaggagcgcgtcctggtcacc
acgctgaccaagcgcatggccgaagaccttaccgacttcctggccgagcacggcgtgcgg
gtgcgctacctgcattccgacatcgatacggtcgagcgcgtcgagatcatccgcgacctg
cgcctgggcacgttcgacgtgctggtgggcatcaacctgctgcgcgaagggctggacatc
cccgaggtgtcgctggtggccatcctggatgccgataaagaaggcttcctgcgttccgag
cgcagcctcatccagaccatcggccgcgccgcacgcaacctgaacggccatgccattctg
tacgccgatgccattacggcctcgatgcggcgggccatggacgaaaccgagcggcggcgc
accaagcaactggcgttcaacgccgagcacggcattacggcgcgcggcgtcaacaaggcg
gtgcgcgaactcatcgacggcatcgtcgcgccggcccgccacgatacccttgaatccgcc
atcgcccccgaggtgctggccgacgaaaagtcggtagcccgcgagatccgccgcctggaa
aaactcatgaccgaccacgcccgcaacctggagttcgagcaggccgcggcggcgcgcgac
gcgctcaatgcgctcaagcagcgcgtgttgctggatggcgcggcatag
DBGET
integrated database retrieval system
