Bordetella petrii: Bpet2808
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Entry
Bpet2808 CDS
T00637
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpt
Bordetella petrii
Pathway
bpt03420
Nucleotide excision repair
bpt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bpet2808
03430 Mismatch repair
Bpet2808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpt03400
]
Bpet2808
Enzymes [BR:
bpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bpet2808
DNA repair and recombination proteins [BR:
bpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bpet2808
MMR (mismatch excision repair)
Other MMR factors
Bpet2808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
VMAP-M0
T7SS_EccA1_N
Motif
Other DBs
NCBI-ProteinID:
CAP43150
UniProt:
A9IRA6
LinkDB
All DBs
Position
complement(2949748..2952006)
Genome browser
AA seq
752 aa
AA seq
DB search
MLEQLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFGLLAVTFTNK
AAREMLARMSAMLPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQTFQILDTTDQLAAIKR
LLKANGIDDEKYPPRDVQRFINGAKEDGLRPGDVEAHDSHRRRLIEIYQLYEAQCQREGV
VDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGASIFAV
GDDDQSIYAFRGANVGNMADFEREYARGTVIRLEQNYRSYGHILDSANALIGHNSGRLGK
NLWTEQGEGEPVRVIEQPSDGIEAQWLVDEVRSLINEGSLRREIAVLYRSNAQSRVLEHA
LFSAGIPYKVYGGLRFFERQEIKHALAYLRLMANPDDDTSWMRVVNFPTRGIGARTLEQL
TDAARAQDTSLFGAVARVAGKGGANLAQFAQLIGRMAHDTRDLPLPELVEHMLDASGLVA
HYKTEREGAERLENLNELITAAAVFASEENFDGLPAGRVPDLGADVPPDGLTPLAAFLAH
AALEAGDNQAQAGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHENSLLEPAGLEEERR
LMYVAITRARQRLYLSLAQSRMLHGQTRYAMRSRFLDEIPEQHLKWLTPRAGVAHAHAGF
GESGTWSGRGDAFGRRPTGIIAPRAPRGVASGVTVGDRQYRIGQGVRHARFGDGTIIGLS
GSGQDAQAQIQFRDVGAKTLALGIAKLDIIQG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgctagagcagctcaaccctgaacaacgcgccgctgtaacgctcgaaccgcagcatgcc
ctggtcctggccggggcaggcagcggcaagacccgggtcctcaccactcgcatggcctgg
ctgattcaaaccggccaggccagtccatttgggctgttggccgtcaccttcaccaacaag
gcggcgcgcgagatgttggcgcgcatgtcggccatgctgcccatcgacacgcgtgggctc
tggatcggcactttccacgggctgtgcaaccgcatgctgcgcgcccaccaccgtgacgcg
ggcctgccgcaaaccttccagattctcgacaccaccgatcaattggccgccatcaagcgc
ctgctgaaggctaacggcatcgacgacgaaaaatacccgccgcgcgatgtgcagcgcttc
atcaacggcgccaaggaagacggcctgcgccccggcgacgtcgaagcccacgacagccac
cgccgccgcctgattgaaatctaccagctgtacgaggcccagtgccagcgcgaaggcgtg
gtcgatttcgccgagttgctgctgcgcgcgtacgaactgctgtcgcgcaacgcgcccgtg
cgcgaacactaccagcggcgcttccggcacattctggtcgacgaattccaggacaccaac
accctgcagtacaagtggctgcggctgctggcaggaggtggcgcgtccattttcgcggtg
ggcgacgacgaccagtccatttacgcgtttcgcggcgccaatgtcggcaacatggccgac
ttcgagcgcgaatacgcgcgcggcacggttatccggctggaacagaactaccgctcgtac
ggccatatcctggattcggccaatgcgctcatcggccataacagcggacgcctgggcaag
aatctctggaccgaacagggcgaaggcgagcccgtgcgcgtcatcgagcagccgtccgat
ggcatcgaggcgcaatggctggtcgacgaagtacgctcgctgatcaacgaaggcagcctg
cgccgcgagatcgccgtgctgtatcgcagcaacgctcaatcgcgcgtgctcgagcatgcg
ctgttctcggccggcatcccgtacaaggtatatggcggcttgcgctttttcgagcgccag
gaaatcaagcatgcgctggcgtacctgcgcttgatggccaatcctgatgacgatacgtcc
tggatgcgcgtggtcaatttccctacgcgtggcattggcgcgcgtacgctcgagcagctt
accgacgcggcgcgcgcgcaggacaccagcctgttcggcgcggtggcgcgcgtggcgggc
aagggcggcgccaatctcgcgcagttcgcccagctgatcggccgcatggcccacgacacc
cgcgatctgccgctgcccgaattggtcgagcacatgctcgacgccagcggactggtggcc
cactataaaaccgagcgtgaaggcgccgagcgcctggaaaacctcaacgaactgatcaca
gccgcggcagtgttcgcctcggaagagaacttcgacggcctgcccgccggacgcgttccc
gacctgggcgccgacgtgccgcctgacgggctgacgccgctggccgccttcctggcccac
gccgccctcgaggcaggcgacaaccaggcgcaggcaggccaggacgccgtccaactgatg
accgtgcacgcggccaagggcttggaattcgacgccgtgttcatcacgggcctcgaagag
ggcctgttcccccacgaaaacagtctgcttgaaccggcgggcctggaagaagagcggcgc
ctgatgtacgtggcgatcacgcgggcgcgccagcggctttacctgagcctggcgcaaagc
cgcatgctgcatggccagacacgctacgccatgcgttcgcggttcctggacgaaatcccc
gagcagcacctgaaatggctcactccgcgcgccggcgttgcccatgcccatgcggggttt
ggcgagtcgggcacctggagcggccgtggcgacgccttcgggcgcaggccgaccggcatc
attgctccccgcgcgccgcgtggcgttgccagcggcgtcacggtgggcgaccggcagtat
cgtatcgggcagggcgtgcggcatgcccgattcggcgacggtaccatcatcggcctgagc
ggctccggccaggatgcccaggcgcagatccagttccgcgatgtcggcgccaagaccctg
gcgctgggcatcgccaagctggatatcatccagggatga
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integrated database retrieval system
