Bordetella petrii: Bpet3118
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Entry
Bpet3118 CDS
T00637
Symbol
dnaE2
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bpt
Bordetella petrii
Pathway
bpt03030
DNA replication
bpt03430
Mismatch repair
bpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bpet3118 (dnaE2)
03430 Mismatch repair
Bpet3118 (dnaE2)
03440 Homologous recombination
Bpet3118 (dnaE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpt03032
]
Bpet3118 (dnaE2)
03400 DNA repair and recombination proteins [BR:
bpt03400
]
Bpet3118 (dnaE2)
Enzymes [BR:
bpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bpet3118 (dnaE2)
DNA replication proteins [BR:
bpt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bpet3118 (dnaE2)
DNA repair and recombination proteins [BR:
bpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bpet3118 (dnaE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
CAP43460
UniProt:
A9ITS7
LinkDB
All DBs
Position
complement(3271621..3275112)
Genome browser
AA seq
1163 aa
AA seq
DB search
MSEAVNPTPAFVHLRVHSEFSVVDGIVRIPDLIKRVAQLGQPAVALTDLSNIFGLIKFYK
GARGAGVKPIAGCDVWLTNDDDPEKPFRLLLLVRNHQGYLNLCELLTRSFLENQGRGRAE
IRREWLQGRQGLIVLSGGRAGDIGHALDAGNAVTALALARQWGALFPGAFYIELQRAGAD
GDEAYTQAAMRLAAEAGLPVVATHPVQFLDASEYQAHEARVCIAQGEILADPRRVRRFTK
DQYLLSTEEMARRFADVPSALANTVEIAKRCNLTLVLGKPRLPNFPTPDGISLDDYLVQL
SEEGLEKRLEFLFPDPAERDAKRAQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNG
VPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVI
DYVKMKYGREAVSQIATFGTLGAKAVVRDAGRVLDMPYLFCDGLSKLIPFNPADPWSLDR
TLKDEPAFKERYEQEEEVRALVDLARPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPG
QENSAVSQFDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRRFNESKRDFDIMALPLDDP
AAYKVLCDANTTAVFQLESRGMKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVNR
KHGRATVDYFHPDLEATLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEE
MAKHRELFEKGAKEKGHDPNLAVKLFDLMEKFAGYGFNKSHSAAYALIAYQTAWLKAYHP
TEFLAATISSDMDDTDKVQVFCRDAQDNGVLVLPPDVNASGYRFEPVADEHTREGRPPRT
MRYGLGAVKGTGQGAVEEILRAREADGPFANLFDFCRRVNKHAVNRRTIEALIKAGAFDT
IEPNRAAMLASVGTAMEAAEQAARSANQVSLFGDDSGDVVAGELSKVAPWNLHTKLTEEK
SALGFYFSGHLFDHWRDEVRRIVPMPLARVEPQRDLQWMCGVLAGVRTMMTRRGKMVFAV
LDDGTAQVEISVFNELYEKHRARLREDQLLIVQGKVSNDDYSGGMRIVAEQLYDLQLARE
ARARSLRVRLNGQADAGRLRQLLNPFRAEPENGVPGVPVDIVYGRDNFLCTVRLGEEWRV
RMADALLENLSAWAKPDGVEVTY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccgtcaatcccacgcctgcctttgtccatttgcgcgtccattccgagttt
tcggtggtggacggcatcgtccgcattcccgacctgatcaagcgcgtcgcccagctgggc
cagcccgccgtggcgctgaccgatctttccaacattttcggcctgatcaagttctacaag
ggcgcgcgcggggccggcgtgaagccgatcgccggctgcgacgtctggctgaccaacgac
gacgatcccgaaaaaccgtttcgcctgctgttgctggtgcgcaaccatcagggctacctg
aacctgtgcgagctgctgacccggtcgtttctcgaaaaccaggggcgcgggcgcgccgaa
atccgccgcgaatggctgcagggccggcagggcctcatcgtgctgtcgggcggccgcgcc
ggcgacatcggccacgcgctggacgccggcaacgccgtcacggctctggccctggcgcgg
cagtggggcgcgctgttccctggcgcgttctacattgaattgcagcgcgccggcgccgac
ggcgacgaggcctatacccaggctgccatgcggctggccgccgaggccggcctgccggtg
gtggccacccacccggtgcagttcctcgacgcatccgaataccaggcgcacgaggcgcgc
gtgtgtatcgcccagggagaaatcctggccgacccgcgccgggtgcgccgcttcaccaaa
gaccagtacctgctcagcaccgaagaaatggcccgccgctttgccgacgtgccatcggcc
ctggccaatacggtggaaatcgccaaacgctgcaacctgacgctggtgctgggcaagccg
cgcctgcccaacttccccacgcctgacggcatttcgctcgacgactacctggtccagctt
tccgaagaagggctggagaaacgcctggagttcctgtttcccgatccggccgaacgcgac
gccaaacgcgcccagtactacgagcggctgcgctgggaatgcaagaccatcatccagatg
ggctttcccggctacttcctgatcgtgcaggacttcatcaactggggcaagaacaacggc
gtgccggtgggcccgggccgcggctcgggggcgggttcgctggtggcgtacgcgctgggc
atcaccgacctcgatcccatccgctacgacctgctgttcgaacgcttcctgaatcccgag
cgggtatccatgcccgacttcgatatcgacttctgccaggacaaccgcgaacgcgtcatc
gactacgtcaagatgaaatacggccgcgaggccgtcagccagatcgccactttcggcacg
ctgggcgccaaggcggtcgtgcgcgatgccggacgggtgctcgacatgccctacctgttc
tgcgacgggttgtccaagctcattccgttcaacccggccgatccctggtcgctcgatcga
acgctaaaggacgagccagctttcaaggaacgctacgagcaagaggaagaagtccgggcg
ctggtcgacttggcgcgcccgctcgaaggcctgacgcgcaacatcggcatgcacgcgggc
ggggtgctgatcgccccgggcaagcttaccgacttctgcccgctgtattgccagcctggc
caggaaaacagcgcggtgtcgcagttcgacaaagatgacgtcgaagccgccggcctggtc
aagttcgacttcctgggactgcgcaacctcaccatcctggactgggcggtgcgctatgtg
cgccgcttcaatgagtccaagcgcgactttgacatcatggcgctgccgctggacgacccg
gcagcctacaaggtgctgtgcgacgccaacaccaccgcggtgttccagctcgaatcgcgc
ggcatgaaagagctgctgaaaaagctgcggcccaacaccttcgaagacatcatcgccatg
ctggccctgtatcgcccggggccgctcgagtccggcatggtcgacgatttcgtcaaccgt
aagcacgggcgcgctacggtcgattacttccaccccgacctggaagccaccctgaagagc
acctacggggtcatcgtctaccaagaacaggtgatgctgatctcgcagatcatcggcggc
tattcgctgggcggcgccgacctgctgcgccgcgccatgggcaagaaaaagcccgaggaa
atggccaagcaccgtgagctcttcgagaaaggcgccaaggaaaaaggccacgatcccaat
ctggcggtcaagctcttcgacctgatggagaagttcgccggctatggcttcaacaagtcg
cactcggcggcctacgcgctcatcgcgtaccagaccgcctggctgaaagcctaccatccc
accgaattcctggcggccaccatctcgtccgacatggacgacaccgataaggtgcaggtc
ttctgccgcgatgcgcaagacaacggcgtgctggtgctgccgcccgacgtcaacgcctcg
ggctatcgcttcgagccggtggccgacgagcacacccgcgagggccggccgccgcgcacc
atgcgctacggcctgggcgcggtcaagggcacggggcagggcgcggtcgaagaaattctg
cgcgcgcgcgaggccgatggcccgttcgccaacctgttcgatttctgccgccgcgtcaac
aaacatgcggtcaaccggcgcaccatcgaagccctgatcaaggccggcgcgttcgacacc
atcgagcccaatcgcgcggccatgctggcgtcggtgggcaccgccatggaagccgccgag
caagcggcgcgcagcgccaaccaggtctcgctgttcggcgacgacagcggcgacgtggtc
gccggcgaactcagcaaggtcgcgccctggaacctgcacaccaagctcaccgaagaaaag
tcggcgctgggcttttacttcagcggccacttgttcgatcactggcgcgacgaagtgcgc
cgcatcgtgcccatgccgctggcgcgcgtcgaaccgcaacgcgacctgcaatggatgtgc
ggggtgctggccggcgtgcgcaccatgatgacgcggcgcggcaagatggtgttcgccgtg
ctcgacgatggcaccgcccaggtcgaaatctcggtgttcaacgagctgtacgaaaaacac
cgtgcacgcttgcgcgaagaccagctacttatcgtgcagggcaaggtcagcaacgacgac
tattccggcggcatgcgcatcgtcgccgaacagctctacgatttgcaattggcgcgcgaa
gcgcgcgcccggtcgctgcgcgtgcggctcaacggccaggccgatgccggcaggctgcgc
caactgctcaatccgttccgcgccgagcctgaaaacggcgtgcccggcgtgccggtcgat
atcgtgtacggccgcgacaatttcctgtgcacggtgcgcctgggcgaagaatggcgcgtg
cgcatggccgatgccttgctcgaaaatttgtctgcctgggccaagcccgacggggtcgag
gtcacttactga
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