Bordetella petrii: Bpet3126
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Entry
Bpet3126 CDS
T00637
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bpt
Bordetella petrii
Pathway
bpt03030
DNA replication
bpt03410
Base excision repair
bpt03420
Nucleotide excision repair
bpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bpet3126 (polA)
03410 Base excision repair
Bpet3126 (polA)
03420 Nucleotide excision repair
Bpet3126 (polA)
03440 Homologous recombination
Bpet3126 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpt03032
]
Bpet3126 (polA)
03400 DNA repair and recombination proteins [BR:
bpt03400
]
Bpet3126 (polA)
Enzymes [BR:
bpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bpet3126 (polA)
DNA replication proteins [BR:
bpt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Bpet3126 (polA)
DNA repair and recombination proteins [BR:
bpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Bpet3126 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bpet3126 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
LRV
WD40_4
Motif
Other DBs
NCBI-ProteinID:
CAP43469
UniProt:
A9ITV6
LinkDB
All DBs
Position
complement(3283394..3286240)
Genome browser
AA seq
948 aa
AA seq
DB search
MRALPNTLTAGPISASFSAAARISDIITGICLPAGVSCSAFVTMNKTLLLVDGSSYLYRA
FHAMPDLRNAQGEPTGALYGVVNMLRKLVSDHKADYAACIFDARGKTFRDDLYPDYKSHR
PPMPEDLAAQIEPIHQAVRALGWQVLAIEGVEADDIIGTLACQASGMGIRTIVSTGDKDL
AQLVDANVTLVNTMSGEVLDETGVRNKFGVPPDRIVDYLMLVGDAIDNVPGVAKVGPKTA
AKWLAEFGSIDSLVEQADGIKGVAGNNLREAIGQFPLTRQLLTVKCDCDLAGHIGGIDDL
APRQPDTDTLQALYERYGFRTWLRELTGDSQRVPQGDARVIAEAPAAPAELRYLIISSWP
AFDEWMAQAADTPLVALDTETTSLDEMQASLVGISMALAPGVACYIPLAHRGPDSAEQLP
KREVLERMRAWLQDPARPKLLHHAKYDAHVFANEGVALAGIQDDTMLQAYVLESHRGVGL
NDLAQRYLGRGGITYEELCGKGAKQIGFDEVAVEQAGHYACEDADFTLQLHHALRPRVAA
DAGLERIYQLEIQVSRVLTVVERNGVKVDAAELGRQSHRLGQEMLQLEQRAYELAGQPFN
LNSPKQLGEILFGRMQLPVVRKTAGGAPSTDEEVLTRLAQDYPLPQVLLEYRGLSKLKST
YTDKLPRMINARTGRVHTHYSQAAVVTGRLASSDPNLQNIPVRTEAGRRVREAFVAEHGV
LVSADYSQIELRIMAHVSDDANLQQAFAAGKDIHRATASEIFGVALDEVGADQRRAAKAI
NFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVAQYMEHTRQLARQQGYVETVFG
RRLQLPDIRAASGPRRQGAERAAINAPMQGTAADLIKMAMVAVQDWLDAERLATRMIMQV
HDELILEVPDGELDAVRARLPELMCGVARLRVPLVAEVGVGPNWEQAH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcactgccgaacacgctgacggcggggccgatatcggccagtttctctgccgcc
gcccgtatctctgacataatcaccggtatttgcttgccggcgggcgtttcttgttctgct
tttgtaaccatgaataaaaccttattgctggtagacggttcgagctacttgtaccgcgcc
ttccacgctatgcccgatttgcgcaatgcgcaaggtgaacctacgggcgcgctgtacggc
gtcgtcaatatgctgcgcaagctggtctcggaccacaaagcagattacgcagcgtgtatt
ttcgacgcgcgcggcaagactttccgcgacgacctgtatcctgactataaatcgcaccgg
ccgcccatgccggaagacttggcggcccagatcgagcccatccaccaggcggtgcgggcg
ctgggctggcaggtgctggccatcgagggagtcgaggccgacgacatcatcggcaccctg
gcatgccaggcgtcgggaatgggcatacgcaccatcgtgtctaccggcgacaaagacctt
gcccagctggtggatgcgaacgtcacgctggtcaataccatgagcggcgaagtgctcgac
gagaccggcgtacgcaacaagttcggcgtgccgcccgatcgcatcgtcgactacctcatg
ctggtgggcgacgccatcgacaacgtgccgggcgtggccaaggtagggcccaagacggcc
gccaagtggctggccgaattcggctcgatcgactcgctggttgaacaggccgatggcatc
aagggcgtggccggcaacaacctgcgcgaggccatcggccagtttcccctgacgcgccag
ttgctgaccgtgaagtgcgattgcgacctggctggtcacatcggcggcatcgacgacctg
gcgccgcgccaacccgataccgatacgctgcaggcactctacgagcgctacggtttccgc
acctggctgcgcgagctcacgggcgattcccaacgcgtgccgcagggcgatgcccgggtc
attgccgaggcgcccgccgcgccggccgagctgcgctacctgatcatctcgagctggccg
gcgttcgacgaatggatggcccaggcggcagacacgccgctggtggcgctcgacaccgaa
accacctcactcgacgaaatgcaggccagcctggtcggcatttcgatggcgctggcgccg
ggcgtggcttgctacatcccgttggcccaccgcggtcccgacagcgccgagcaactaccc
aagcgcgaagtgctcgaacgcatgcgcgcctggctgcaagacccggcgcgccccaagctg
ctgcaccatgccaagtacgatgcccatgtgttcgccaacgaaggcgtcgcgctcgcgggc
atccaggacgacaccatgctgcaggcctacgtgctcgaatcgcaccgcggcgtgggcctg
aacgacctggcgcagcgctacctggggcgtggcggcatcacctacgaagagctgtgcggc
aagggcgccaagcagattggcttcgacgaagtggcggtcgagcaggctggccactatgcc
tgcgaagacgccgacttcaccctgcagctgcaccacgcgctgcgtccgcgcgtggctgcg
gacgcgggccttgagcgcatttaccagctcgagatccaggtgtcgcgcgtgcttaccgtg
gtcgagcgcaacggggtcaaggtcgacgccgccgaactgggccgtcagagccaccggctg
ggccaggaaatgctgcagctcgaacagcgcgcctacgaactggcgggccagcccttcaac
ctgaattcccccaagcaactgggcgagatcctgttcggccgcatgcaattgccggtggtg
cgcaagaccgccggcggcgcgccgtccaccgacgaagaagtgctgacgcggctggcgcaa
gactacccgttgccgcaagtgttgctggaataccgcggcctgtccaagctcaagtccacg
tacaccgacaagctgccgcgcatgatcaacgcgcgcacaggccgcgtgcacacgcattat
tcgcaggcggcggtcgtcacggggcggctggcctcgtccgacccgaacctgcagaacatc
ccggtgcgcaccgaggcggggcggcgcgtgcgcgaagccttcgtggccgaacatggcgtg
ctggtgtcggccgattactcccagatcgagctgcgcatcatggcgcatgtgtccgatgac
gccaacttgcagcaggcctttgccgccggcaaagacattcaccgcgccacggcgtccgag
atcttcggcgtggcactcgacgaggtcggggcagaccagcgccgcgccgccaaggccatc
aattttggtctgatctacggcatgggggtgttcggcctggcctcgaacctgggcatcacg
cgcgacgccgcgcaggcctatatcgaccgttacttcgcccgctatccgggcgtggcgcag
tacatggaacacacccggcagctggcgcgccagcaagggtacgtggaaaccgtgttcggc
cgccgcctgcagctgcccgacatccgtgccgcttcagggccgcgccggcagggcgctgaa
cgtgccgccatcaacgcgcccatgcagggcacggcggccgatctcatcaagatggccatg
gtcgccgtgcaagactggctcgatgccgagcgcctggccacccgcatgatcatgcaggtg
cacgatgagctgatactcgaagtgcccgacggcgaactcgacgccgtgcgcgcgcgcctg
ccggaactcatgtgcggcgtggcgcggttgcgggtgccgctggtggccgaggtaggcgtg
gggcccaactgggaacaggcgcactga
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