Bordetella petrii: Bpet3353
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Entry
Bpet3353 CDS
T00637
Symbol
polC
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bpt
Bordetella petrii
Pathway
bpt03030
DNA replication
bpt03430
Mismatch repair
bpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bpet3353 (polC)
03430 Mismatch repair
Bpet3353 (polC)
03440 Homologous recombination
Bpet3353 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpt03032
]
Bpet3353 (polC)
03400 DNA repair and recombination proteins [BR:
bpt03400
]
Bpet3353 (polC)
Enzymes [BR:
bpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bpet3353 (polC)
DNA replication proteins [BR:
bpt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bpet3353 (polC)
DNA repair and recombination proteins [BR:
bpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bpet3353 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CAP43695
UniProt:
A9HX18
LinkDB
All DBs
Position
complement(3522222..3522755)
Genome browser
AA seq
177 aa
AA seq
DB search
MQALGGPFAVADLETTGLSTASCEILEFAAVHVGPDGAIEREFSQVVRTRGTVPPFITRL
TGITQAEVDGHGIPVAEAFSAFLAFLADAPVFFHNASFDCRFLQAAAEHTGLPFANATHC
TLQLARQAWPELPSHKLQVLARHVGAADPTHRALADVRSTVAVALAARRKLAGVQGF
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgctgggcgggccgtttgccgtggccgacctggaaaccaccggcttgtccacc
gccagctgcgaaatcctggaattcgccgcggtgcacgtggggcccgacggcgccatcgag
cgcgagttttctcaggttgtgcgcacgcgcgggacggtgccgccgttcattacccgcctg
accggcattacccaggccgaggtcgacggccacggcattcccgtggccgaggcgttttcc
gccttcctggctttcctggccgacgcgccggtgtttttccataacgcgtcgttcgattgc
cgctttttgcaggccgcggccgagcataccgggctgccgttcgccaacgccacgcattgc
acgctgcagctggcccgccaggcatggcccgagctgccgtcgcacaagctgcaggtgctg
gcgcgccatgtgggcgcggccgatcccacccaccgcgcgctggccgacgtgcgcagcacg
gtggccgtggccctggccgcgcgccgcaagctggcgggcgtccagggtttctag
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