KEGG   Bordetella petrii: Bpet3353
Entry
Bpet3353          CDS       T00637                                 
Symbol
polC
Name
(GenBank) putative exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bpt  Bordetella petrii
Pathway
bpt03030  DNA replication
bpt03430  Mismatch repair
bpt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bpet3353 (polC)
   03430 Mismatch repair
    Bpet3353 (polC)
   03440 Homologous recombination
    Bpet3353 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpt03032]
    Bpet3353 (polC)
   03400 DNA repair and recombination proteins [BR:bpt03400]
    Bpet3353 (polC)
Enzymes [BR:bpt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Bpet3353 (polC)
DNA replication proteins [BR:bpt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Bpet3353 (polC)
DNA repair and recombination proteins [BR:bpt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Bpet3353 (polC)
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: CAP43695
UniProt: A9HX18
LinkDB
Position
complement(3522222..3522755)
AA seq 177 aa
MQALGGPFAVADLETTGLSTASCEILEFAAVHVGPDGAIEREFSQVVRTRGTVPPFITRL
TGITQAEVDGHGIPVAEAFSAFLAFLADAPVFFHNASFDCRFLQAAAEHTGLPFANATHC
TLQLARQAWPELPSHKLQVLARHVGAADPTHRALADVRSTVAVALAARRKLAGVQGF
NT seq 534 nt   +upstreamnt  +downstreamnt
atgcaggcgctgggcgggccgtttgccgtggccgacctggaaaccaccggcttgtccacc
gccagctgcgaaatcctggaattcgccgcggtgcacgtggggcccgacggcgccatcgag
cgcgagttttctcaggttgtgcgcacgcgcgggacggtgccgccgttcattacccgcctg
accggcattacccaggccgaggtcgacggccacggcattcccgtggccgaggcgttttcc
gccttcctggctttcctggccgacgcgccggtgtttttccataacgcgtcgttcgattgc
cgctttttgcaggccgcggccgagcataccgggctgccgttcgccaacgccacgcattgc
acgctgcagctggcccgccaggcatggcccgagctgccgtcgcacaagctgcaggtgctg
gcgcgccatgtgggcgcggccgatcccacccaccgcgcgctggccgacgtgcgcagcacg
gtggccgtggccctggccgcgcgccgcaagctggcgggcgtccagggtttctag

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