Bordetella petrii: Bpet3400
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Entry
Bpet3400 CDS
T00637
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpt
Bordetella petrii
Pathway
bpt03420
Nucleotide excision repair
bpt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bpet3400
03430 Mismatch repair
Bpet3400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpt03400
]
Bpet3400
Enzymes [BR:
bpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bpet3400
DNA repair and recombination proteins [BR:
bpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bpet3400
MMR (mismatch excision repair)
Other MMR factors
Bpet3400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
NACHT
Motif
Other DBs
NCBI-ProteinID:
CAP43743
UniProt:
A9HXB3
LinkDB
All DBs
Position
complement(3581331..3583454)
Genome browser
AA seq
707 aa
AA seq
DB search
MNIQYLPLRSAMSAPPHSRPDPADYLSELNPAQRAAAEFGVGQPDAPALLVIAGAGSGKT
STLAHRVAHLILNGADPQRMLLLTFSRRAAQEMERRVGMVLRRVMKLHATQQAPALPWAG
TFHGIGARLLRDCATRIGLSESFTIHDRGDAEDLMGMVRHERGLSATAERFPLKGTCLAI
YSRVINSQAPLADVLKQAFPWCAQWEDALKGLFGAYVQAKQDQQVLDYDDLLLYWSEMMQ
DEVLAREIGARFDHVLVDEYQDTNRLQSAILLAMKPDGQGLTVVGDDAQSIYSFRAATVR
NILDFPGQFARPAHVITLERNYRSTQPILDASNAVIGLAAERYTKNLWTDRASSNRPALV
TVSDEAGQARWVADQVLAQREAGATLKSQAALFRASHHSAALELELTRRNIPFVKFGGLR
FLEAAHIKDVLSLLRWAENPRGRLAGFRAAQLLPGIGPAIAGRLMDALADAPEPLAALRD
FKPGAAAKADWEAFAQTYAALRAPGLQWPADLDLALRWYAPQLERLYDDARVRKADLDQL
ARIAAGYASRERFLTELTLDPPDATSAESGPPLRDEDYMILSTIHSAKGQEWKAVYVLNV
VDGCIPSDMSTGTAEEIEEERRLLYVAMTRAKESLQLVVPQRFYVHQQTGLGDRHVYGSR
TRFIPDALVPLFEMLPAPPELPHGRGRPPAESAPRIDVAQRVRKLFA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacagtatttaccgctacggtccgccatgtccgcccccccgcattcccgtccc
gatcccgccgactacctgtccgagctcaaccccgcgcagcgggctgccgccgaattcggc
gtgggccagcccgatgcgcccgcgctgctggtcattgcgggcgccggctcgggcaaaacc
agtacgctggcccaccgggttgcccacctgatcctgaacggcgccgacccgcagcgcatg
ttgctgctgaccttctcgcgccgcgccgcccaggaaatggagcgccgcgtgggcatggtg
ctgcgccgcgtgatgaagctgcatgccacccagcaggcgcccgcgctgccgtgggccggc
accttccacggcattggcgcccggttgctgcgcgactgcgccacccgcatcggcctgtcg
gaaagcttcaccatccatgaccggggcgacgccgaagacctgatgggcatggtgcggcac
gaaaggggcctgtcggccaccgctgagcggttcccgctcaagggcacctgcctggccatt
tactcgcgggtgatcaacagccaggctccgttggccgatgtcctgaagcaggcctttccg
tggtgcgcccaatgggaagacgcgctgaagggcctgttcggcgcctatgtgcaggccaag
caggaccagcaggtgctcgattacgacgacctgctgctgtattggtcagagatgatgcaa
gacgaagtgctggcccgggagatcggggcgcgctttgaccacgtgctggtcgacgaatac
caggacaccaaccgcctgcagtcggccatcctgctggccatgaaacccgacggccagggc
ctgaccgtggtgggcgacgacgcgcagtctatttattcgttccgcgccgccaccgtgcgc
aacattctggattttcccggccagttcgcgcggcccgcgcacgtgatcacgctggagcgc
aactatcgttccacccagcccatcctggatgcgtccaacgccgtcatcgggctggccgcc
gagcgctacaccaagaatctctggaccgaccgcgcgtcgtcgaaccggcccgcgctggta
accgtaagcgacgaggccgggcaggcgcgctgggtggccgaccaggtgctggcgcagcgc
gaagccggcgccacgctgaagtcgcaggcagccttgttccgcgcgtcgcaccacagcgcc
gcgctcgaactcgagctcacccgccgcaatatcccgttcgtgaaattcggcgggctgcgt
ttcctggaagccgcccacatcaaagacgtgctgtcgttgctgcgctgggccgagaacccg
cgcgggcggctggccgggtttcgcgccgcgcagctgctgcccggcatcgggccggccatc
gcggggcgcctgatggatgcgctggccgacgctcccgagccgctggcggcgctgcgcgac
ttcaagccgggcgcggcggccaaggccgattgggaagcctttgcacaaacttatgccgcc
ctgcgcgcgccgggcctgcaatggccagccgacctggacctggcgttgcgctggtatgcg
ccgcagctcgaacgcctgtacgacgacgcgcgcgtgcgcaaggccgacctcgaccagctg
gcgcgcatcgcagccgggtacgccagccgcgaacgcttcctgaccgaactgacgctggac
ccgccggacgccaccagcgccgaatcgggcccgccgctgcgcgacgaagactacatgatc
ctgtccaccattcattcggccaagggccaggaatggaaagcggtgtatgtgctgaacgtc
gtcgatggctgtattccatccgacatgagcactggcacggccgaggaaatcgaagaagaa
cggcgcctgctgtacgtggccatgacgcgcgccaaagaaagcctgcagctggtggtgccg
cagcgcttctatgtgcaccagcagaccggcctgggcgaccgtcatgtatacgggtcgcgc
acgcgtttcatcccggacgcgctggtgccgctgttcgagatgctgcccgcgccgcccgag
ctgccgcacggccgaggccgcccacccgccgaatcggcgccgcgcatcgacgtggcgcag
cgcgtgcgcaagctgtttgcctag
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