Bordetella petrii: Bpet4784
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Entry
Bpet4784 CDS
T00637
Symbol
dapF
Name
(GenBank) dapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bpt
Bordetella petrii
Pathway
bpt00300
Lysine biosynthesis
bpt00470
D-Amino acid metabolism
bpt01100
Metabolic pathways
bpt01110
Biosynthesis of secondary metabolites
bpt01120
Microbial metabolism in diverse environments
bpt01230
Biosynthesis of amino acids
Module
bpt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bpt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Bpet4784 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Bpet4784 (dapF)
Enzymes [BR:
bpt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Bpet4784 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
CAP45136
UniProt:
A9IH28
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All DBs
Position
5052840..5053754
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AA seq
304 aa
AA seq
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MGDNRPMIWNFTKMHGAGNDFVVLDGVRQAIDITPERARALADRHFGIGADQILLVEPPT
HPEADFRYRIFNADGSEVEHCGNGARCFVRFVHEQRLSSRNPLRAEIATGILVLDEGDDE
QVTVDMGVTRFDPAALPFDTAGLASAAQGSDTLWQLDLPDAPPGLPRSVQVSAVAISNPH
AVQQVDDVDAAPVAAIGPLIERHPRFARRVNAGFMQVLDRHSIRLRVYERGAGETLACGT
GACAAVAAGIRRGLLDSPVRVHTRGGTLTVDWNGEHLRMTGPATSVFTGQVDIDKLVFSM
ALGR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgggcgataatcgaccgatgatctggaacttcaccaaaatgcatggcgcgggcaacgac
ttcgtcgtgctcgacggcgtgcgccaagccatcgacatcacgcccgagcgcgcgcgcgcc
ctggccgaccggcatttcggcatcggcgccgaccagatcctgctggtcgagccccccacg
caccccgaggccgacttccgctaccgcatcttcaacgccgacggctccgaggtcgaacac
tgcggcaacggcgcgcgctgcttcgtgcgtttcgtgcacgagcagcggctgtccagccgc
aatccgctacgcgccgaaatcgccaccggcatcctggtgctggacgaaggcgacgacgaa
caagtcaccgtcgacatgggcgtcacccgcttcgaccctgccgccttgccgttcgacacc
gcgggcctggcttcggccgcccagggcagcgacaccctctggcagcttgacctgcccgac
gcgccccccggcctgccgcgcagcgtacaggtgtcggccgtggccatctccaacccccac
gccgtacagcaggtcgacgacgtcgatgccgcgccggtggccgccatcggcccgctgatc
gaacgccatccgcgtttcgcgcggcgcgtgaacgccggcttcatgcaagtgctcgaccgc
cattccatccgcctgcgcgtgtacgaacgcggcgccggcgaaaccctggcctgcggcacc
ggcgcctgcgccgcggtggcggccggcatccggcgcggcctgctcgattcgcccgtgcgc
gtgcacacacgcggcggcacgctcactgtcgactggaacggtgagcacctgcgcatgacc
ggcccggccacgtccgtcttcacgggccaggtcgacatcgacaaactggttttctccatg
gccctcggccgctaa
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